Pseudolactococcus piscium: LACPI_0004
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Entry
LACPI_0004 CDS
T03909
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lpk
Pseudolactococcus piscium
Brite
KEGG Orthology (KO) [BR:
lpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpk03400
]
LACPI_0004
Enzymes [BR:
lpk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LACPI_0004
DNA repair and recombination proteins [BR:
lpk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LACPI_0004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
ResIII
AAA_16
RNA_pol_Rpb1_1
AAA_30
DUF5320
Motif
Other DBs
NCBI-ProteinID:
CEN27204
UniProt:
A0A0D6DTT2
LinkDB
All DBs
Position
I:6077..9727
Genome browser
AA seq
1216 aa
AA seq
DB search
MNHLTEQDISALQENESGKDMPKTPEQIEAIYRTGTNILVSASAGSGKTFVMTERILYYI
LKGVPLKSLFISTFTNKAAAELKTRLDKKIRETRLKGKKHESLHLLTQALQDLPSADIGT
MDSFTLKFLKENFYLKHIDPTFRLLVDKTEQDVIKQELFDKLVEASLAGKGTLSKERFIK
VMTNFSSDRKIAPFYSVLDKINTFADSLEDPIKWLTHDFLTGFSTIGSYADLPDRFTDGL
QDSLFQIYQILDENLTTGLITGKAKISNTEEFLGNYDYLVACLEQKAFPKFADFYQQLKF
QFIPNANNKETRDEALESQKKSLKASLDTYRKNLDEFVEAIRHQAIIEKYHDAASELTAD
LQEIALTFYQDYHDYKLNNACLEYADVTHLTIAILQENEVLRKVYQTQYVEVMVDEYQDT
NHLQEAMLTLLSNGHNRFMVGDVKQSIYGFRLADPSLFMAKYEGYQQPMSDGKLIRLKEN
FRSRPEVINFTNQVFKRLMDKNIGEMVYGDEEMLVVGNPSYAKETSTAFTAELLIYQDPK
HQVEDDAALSKDELVMTAQEIKRLSEQGVAYEEIVILVRSKTNNAEIERVLQSFDIPVVL
DEGKMTYLQAMEVLVMLDVLRAVDNPLFDVSFVALLKSPLFNFDENELAVLSLQASNDVT
FYEKYQKTLDGDGLKPDLVDAQLRYKLENFTDLFNQWQLFSQQESLHSLIWKIYRDTHYY
DYVGGMKNGQLRQANLAALADRAASYESSGYKGLFQFIKMIDSFMTNKNDLTSINVALPT
HAVRVMTIHKSKGLEFPYVFILNFNKKFNMKDLSGDLILSRKNGAGINLTADFKAEVDTD
FPYALVKMATLPHMANALEKSYQSLAEEMRMLYVAFTRAVNKVYMVGKTDASKIDEDGLF
SEYQQVAFDQNGLLDTRIRKSSKGYLNWILGIYHATTVKSELGLNLRLITDDDLAEMLPS
SYQEANSFDSLLLASQAFDGTMDTIEEVKLAKDMLASTEQLNHKYAAGIQLPTIQTPSQI
KKRYEHLISENDVVVQSKQKYSQFEFLKTDKKVSPTELGTAVHELMQSLDFTNVSRETLA
HTLKKLAVRDEVKLKIDQAKIFSLFDTDFGKLLVAQFDNISREAPFSMLKTDDASGQQYV
IRGIIDGFIKLDNKIILFDYKTDHFTDLAKIPEIKAQYQLQMSLYAESLASAFKVASVEK
YLILLGGPDKVYIEQV
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatctgactgaacaagacatctcagcattacaagaaaatgaatctggtaaagac
atgccaaagacaccagagcagattgaggcaatctatcggacaggtacaaatattctagtc
tcagcctctgctggttctggtaagacattcgtgatgacagaacgcattctttattatatc
ttaaagggcgtgccacttaaaagtctcttcatttcaacctttacaaataaagctgctgct
gagttaaaaacaagactagataagaagattcgtgagacacgtcttaaaggaaaaaaacac
gaaagtcttcatctgctaacacaagcattacaagatttacctagtgcggatattgggaca
atggatagcttcacactaaaattcctcaaagaaaatttctatttaaaacatatcgatcct
acttttagactactagttgataaaacagaacaagatgtgatcaagcaagagctatttgat
aaattagttgaggcgtccttagcagggaaagggacgcttagtaaggaacgatttattaag
gtgatgactaatttttcatctgatcgtaaaatagccccattttatagtgtcttagataaa
attaatacatttgctgatagtctggaagatccgattaagtggttgacacatgatttttta
actggcttttcaacaattggcagttatgctgatttaccggataggtttacagatggctta
caggatagcttatttcaaatctaccaaatattggatgaaaatttaacgactggcttgatt
actggtaaggcaaaaattagtaacacagaagaatttttaggtaattatgactacttagta
gcttgcttagagcagaaagcatttcctaagtttgctgatttttatcagcaactaaaattt
cagtttatacccaatgcaaataataaagagactagagatgaggcacttgaaagccaaaag
aaaagcttaaaggcatcacttgatacttatagaaaaaatctggatgagtttgttgaagca
attaggcatcaagccattattgaaaaatatcatgatgctgcaagtgaattgacagcagat
ttacaagaaattgcgctcactttttatcaagactatcatgactataagcttaataatgcc
tgtcttgaatatgctgatgtaacgcatctgacgattgctatcttacaggaaaatgaggtc
ctcagaaaagtctatcaaacacagtatgttgaagtcatggtagatgagtatcaagatacc
aatcatctgcaagaggcgatgttaaccttactatcaaatggtcataatcgatttatggtt
ggtgatgttaaacagtcaatctatgggtttagactagcagatccctcgctttttatggct
aagtatgagggctaccaacagccaatgagcgatggaaaattaatccgacttaaagagaat
tttcgatcaagaccagaagtcatcaattttaccaaccaagtttttaaaagattaatggat
aaaaatattggggagatggtctatggtgatgaagaaatgttggttgttgggaatccatct
tatgctaaggaaacctcaactgcgtttacagcagaattactaatctatcaagatccaaaa
catcaagttgaggatgatgcagcattatcaaaagacgagttggtgatgacagcccaggag
attaagcgattaagtgagcaaggcgtcgcatatgaagaaattgtcatacttgttaggagt
aagacgaataatgcggaaattgaacgtgttctccaatcatttgatattccagtagtcctt
gatgaaggcaagatgacgtatcttcaagccatggaagttttggtcatgttagatgtgttg
agagcagttgacaatccactttttgatgtctcctttgtggcacttttgaaatcccctctg
tttaattttgatgaaaatgaattagcagtccttagcttacaggcctcaaatgatgtaaca
ttttatgaaaaatatcaaaaaacgttagatggagatggtctaaaaccagacttagttgat
gcacaactcagatataaacttgaaaactttactgatttatttaatcaatggcagctattt
tcgcaacaagaaagtttacatagcctgatttggaaaatttatcgcgatacacattattat
gactatgtgggtggcatgaaaaatggccaactcagacaggctaatttagctgcattagca
gatcgtgcagcatcatatgaatcttctggatataagggcctctttcaatttatcaagatg
attgatagttttatgaccaacaaaaatgatttgacatcaattaatgtagcactaccaact
catgctgttcgcgtcatgaccatccataaatcaaagggcctagaatttccatatgtattt
attttgaactttaataagaagtttaatatgaaagacttatctggtgatttaattctttca
agaaaaaatggtgcaggtattaacttaacagcagattttaaggcagaagttgacactgat
ttcccttatgcattagttaaaatggcaaccttacctcacatggcaaacgccttggaaaaa
tcataccaatcactagctgaagaaatgcggatgctttatgttgcctttactagagctgtc
aataaagtttacatggtgggtaagactgatgcctcaaaaatagatgaagatggtcttttc
tcagagtatcagcaagttgcttttgatcaaaatggcctcttagatacgcgcattagaaaa
tctagtaagggctatttgaactggattttgggcatctatcatgcgacgactgtaaaatca
gaattaggtcttaatctaagattaattactgatgatgacttagcagagatgctaccaagc
agttaccaggaagccaactcatttgattcacttttacttgcttcacaagcatttgatggg
actatggatacgattgaagaggttaaattagctaaagatatgctagcatctactgaacag
ctcaatcataagtatgctgcggggattcaattaccaacgattcaaacacctagtcaaatc
aaaaaaagatatgaacatttgatttcagagaatgacgtagttgttcagtctaaacaaaag
tattcgcagtttgaatttttaaagacggataaaaaagtctctcctactgaattaggaaca
gctgtacatgagttaatgcaatcacttgattttacaaatgtttcacgtgaaacattagca
catacactcaaaaaattagctgtcagggatgaagttaagctgaaaattgatcaggctaag
atttttagtttattcgatacagactttggtaagctattagtggctcagtttgacaatata
tctcgtgaagcaccattttccatgctaaaaacagacgatgcctcaggtcaacaatacgtg
atacgtggtattatagatggtttcattaaacttgataataagatcatcctgtttgattat
aagacggatcactttacagacttagctaaaattccagaaatcaaagcgcagtatcaacta
cagatgtccctatatgccgaaagtcttgcgtcagcatttaaggtggcatcagttgaaaag
tatctcattttactgggaggaccagataaggtttacattgaacaagtataa
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