Pseudolactococcus piscium: LACPI_0274
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Entry
LACPI_0274 CDS
T03909
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha RpoA
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lpk
Pseudolactococcus piscium
Pathway
lpk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lpk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LACPI_0274 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpk03021
]
LACPI_0274 (rpoA)
03400 DNA repair and recombination proteins [BR:
lpk03400
]
LACPI_0274 (rpoA)
Enzymes [BR:
lpk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LACPI_0274 (rpoA)
Transcription machinery [BR:
lpk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LACPI_0274 (rpoA)
DNA repair and recombination proteins [BR:
lpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LACPI_0274 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Mg_chelatase_C
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
CEN27474
UniProt:
A0A0D6DU47
LinkDB
All DBs
Position
I:275129..276064
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AA seq
311 aa
AA seq
DB search
MIEFEKPKITKFDEENVYGKFVIEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDGVL
HEFTTIPGVHEDVIQVILAIKGLAIKSYVETEKIIELDVTGPAVITAGDILTDSDIEIVN
KDHYLFTLAEGHSVNARMTVKSGRGYVLAEENKQSDAPIGTIAVDSSYTPVNKVNYQVEP
ARVGEKDNFDKLSLEIFTNGTISAEDALSLSAKILTDHLSLFVNLSEVAQTADTLVDKNE
VKPERALDKVIEELDLSVRSYNCLKRAGINTVADLADMSEPEMLKVKNLGRKSLVEVKDK
LDSLGLSLKKD
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgaaaaaccaaaaattacaaaatttgatgaagaaaatgtctatggtaaa
tttgtcatagaaccgcttgaacgtggttatggtacaacccttggtaactcattgcgtcgt
attcttctttcgtcacttcctggggctgctgttacaagcatccaaattgatggtgtactc
catgagttcacaaccattccaggcgtgcatgaagatgtgattcaagtaattcttgccatt
aagggacttgcaatcaaatcatatgttgaaacggaaaaaattattgaacttgatgtaact
ggacctgcagtcataacagctggagacatccttactgatagtgatattgagattgttaat
aaagatcattacctatttacacttgcagaaggtcactcagtgaacgcccgcatgactgta
aaatcaggtcgtggttatgttcttgcagaagaaaataaacaatctgatgccccaatcggg
acaattgctgtagattcatcttatacaccagttaacaaagttaactatcaagttgaacca
gcacgtgttggtgaaaaagacaactttgacaaattgtcattggaaatctttactaacggc
acaatctctgcagaagatgccttgtcattatctgcaaaaatcttgactgaccatttaagt
ctttttgttaatctgtctgaagtagctcaaactgctgatacattggttgataaaaacgaa
gtaaaaccagagcgtgctttggataaagtcatcgaggaacttgatctttctgttcgttct
tataactgtttgaaacgtgccggtattaatactgttgctgatcttgctgatatgagtgaa
ccagaaatgcttaaagttaaaaacttgggtcgtaaatcattggtagaagtcaaggacaaa
cttgacagcctcggtttatcacttaagaaagactaa
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