Lactococcus piscium: LACPI_0333
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Entry
LACPI_0333 CDS
T03909
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lpk
Lactococcus piscium
Pathway
lpk03030
DNA replication
lpk03410
Base excision repair
lpk03420
Nucleotide excision repair
lpk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LACPI_0333
03410 Base excision repair
LACPI_0333
03420 Nucleotide excision repair
LACPI_0333
03440 Homologous recombination
LACPI_0333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpk03032
]
LACPI_0333
03400 DNA repair and recombination proteins [BR:
lpk03400
]
LACPI_0333
Enzymes [BR:
lpk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LACPI_0333
DNA replication proteins [BR:
lpk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LACPI_0333
DNA repair and recombination proteins [BR:
lpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LACPI_0333
NER (nucleotide excision repair)
GGR (global genome repair) factors
LACPI_0333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
CEN27533
UniProt:
A0A0D6DUS8
LinkDB
All DBs
Position
I:338107..340722
Genome browser
AA seq
871 aa
AA seq
DB search
MTNTEKNLLLIDGSSIAFRAFFALYTQIDRFIAPSGLHTNAIFAFHTMLRNVLDKVQPTH
VLVAFDAGKTTFRTEMFADYKAGRAKTPDEFREQMPFIKEMLAAQGITHYDLANFEADDI
IGTLATQAEKAGFDKVTVVSGDRDLTQLTTEKTTVEITIKGVAELETYTPAYLLEKLGLT
TEQFIDLKALMGDKSDNIPGVTKIGEKTGIKLLLEYGSLTGIYDHVDQMKTSKMKENLIN
DREQAFLSRELATIDLDSPIKIGLEDTIYQGADYDKLKAFYKEMGFHKFLEDLEGVTEKV
VEVIDFTVITDKPSPDMFHEDQFFYLEILGDDYHRDEIIGFAWGDDKQIYVSKDTGLLAD
ISFPKNTFDFKKNKVLLARQGIDYPLVSFDTMLAKYLYSTIENNKISTIADLFGYDLADD
ELVYGKGAKRAVPEDAVLFDHLARKIAALVKTKTPLVDKLRENDQEKLLSDIELPLANVL
AKMEITGIKVSGGVLSEIGLENEQVIKALTAEIYELAGEPFNINSPKQLGVILFEKMGLP
VIKKTKTGYSTAVDVLEQLAAQAPIVDKILKFRQISKIQSTYVTGLLGEIMADGKIHTRY
VQDLTQTGRLSSVQPNLQNIPVRLPEGRKIRKAFLPENADSVLLSSDYSQIELRVLAHIS
GDEHLISAFQKGADIHTSTAMRVFGIDKPEDVTANDRRNAKAVNFGVVYGISDFGLSNNL
GITRKAAKTYIETYFERYPDIKNYMENSVRSARDTGFVETLYHRRRNLPDINARNFSVRS
FAERTAINSPIQGSAADILKVAMINLDKALQAGNYQAKMLLQVHDEIVLDVPNEELSAVQ
ALVKSTMEDAITLAVPLLVDENSGKTWYEAK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatacagaaaaaaacttactcttaatcgatggctcctccatcgcctttcgtgct
ttttttgcactttatacacagattgatcgctttattgcaccatctggcttgcatactaac
gccatttttgcctttcatacgatgttacgaaatgtcttagataaggtgcaaccgacccat
gtcctggttgcttttgatgctgggaaaacgacctttagaactgagatgtttgcagattac
aaagcaggccgtgctaagaccccagatgaatttagagagcagatgccttttattaaggaa
atgcttgcagcacaagggattacccattatgaccttgctaattttgaggcagatgatatt
atcggcaccttggcaacccaggctgaaaaagcaggctttgacaaagttacagtcgtatct
ggtgaccgagatttaacccaattaacgacagagaaaacaacggttgaaatcacgatcaag
ggggttgcggaacttgagacttatacaccggcctacctgttagagaaacttggtttaacg
acggaacaatttattgatttaaaagccttgatgggagataagtcagataatattccgggt
gtgacaaaaatcggtgaaaagacgggtattaaactcttgcttgagtatgggtctttaaca
ggtatctacgatcatgttgatcagatgaagacctctaaaatgaaagagaatctgattaat
gatcgggaacaagccttcctatcaagggagcttgcaacgattgacttggattcacctatc
aaaatcggccttgaggacaccatttatcagggtgctgattatgataaactcaaagcattc
tataaggaaatgggcttccataaattcctagaagacttggaaggtgtgacagaaaaagtt
gttgaagttattgattttactgtgataaccgataaaccaagccctgatatgttccatgag
gatcaattcttctatctagaaattttaggagatgactatcatcgggatgagattattggt
tttgcctggggagatgacaaacagatctatgtgtctaaagatacaggtctgctagcagat
atttctttccctaaaaatacatttgactttaagaaaaataaagtcttactagcacgtcaa
gggatcgattatccactggttagttttgataccatgcttgctaaatatctttactcgacg
attgagaataataaaatctcaactatcgccgatttgtttggctatgatttagctgatgat
gagttggtctatggtaagggggccaagcgagctgtaccagaagatgctgtcttatttgat
catctggctaggaaaatagctgcccttgttaagacgaaaacaccattagtggataaatta
cgagaaaatgaccaagaaaaactcttgtctgatatcgaattgcccctagcaaatgtcctg
gctaagatggaaatcacagggatcaaggtatctggtggtgtcctaagcgagattgggtta
gaaaatgagcaagtcatcaaggccttaacggcagagatttatgagcttgcgggtgaacca
tttaatatcaattctcctaagcaattgggcgtcatcttatttgaaaaaatgggtttaccc
gtcatcaaaaaaacaaagacgggttattcaacagctgttgatgtacttgaacaactcgca
gctcaagcgccgattgtagataaaattttaaaattccgtcagatttctaaaattcagtct
acctatgtgaccggcctcctaggtgaaatcatggcggatggtaagattcatacacgctat
gtccaggatttgacgcaaacaggtcgtttatctagtgtccaaccgaatctacaaaatatt
ccagttcgtttgccagagggacgtaaaattcgcaaagcctttctaccggaaaatgcagac
tcagttttattatcaagtgactattcacagatcgagttacgtgtgttggctcacatctca
ggagatgaacacctgatttcagccttccaaaaaggggctgatattcatacgtcaacagcc
atgcgtgtatttgggatcgacaaaccagaagatgtgacagcaaatgatcgtcgcaatgca
aaagcggtcaactttggtgtggtttatggcatctcagactttggcctatccaataatctt
ggtattactagaaaagctgccaagacctatatcgagacttattttgaacggtatccagat
atcaaaaactacatggaaaatagtgttcgaagtgctagagatacaggttttgtcgaaacg
ctctatcacagacgccgtaatttaccagatatcaatgctagaaatttctctgttcgctca
tttgctgaacggacggcgattaatagcccgattcaaggctcagcagcagatattcttaaa
gtagcgatgattaacttggacaaagccttacaagccggtaactatcaggccaagatgcta
cttcaggtacacgatgaaattgtcctagatgtaccaaatgaggagctttcagcggtacaa
gcactcgtgaaatcaacgatggaggatgcgattactctcgctgttcctttactagttgat
gaaaacagtggcaaaacgtggtatgaagctaaatag
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