Pseudolactococcus piscium: LACPI_0988
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Entry
LACPI_0988 CDS
T03909
Symbol
holA
Name
(GenBank) DNA polymerase III delta subunit HolA
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lpk
Pseudolactococcus piscium
Pathway
lpk03030
DNA replication
lpk03430
Mismatch repair
lpk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LACPI_0988 (holA)
03430 Mismatch repair
LACPI_0988 (holA)
03440 Homologous recombination
LACPI_0988 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpk03032
]
LACPI_0988 (holA)
03400 DNA repair and recombination proteins [BR:
lpk03400
]
LACPI_0988 (holA)
Enzymes [BR:
lpk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LACPI_0988 (holA)
DNA replication proteins [BR:
lpk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LACPI_0988 (holA)
DNA repair and recombination proteins [BR:
lpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LACPI_0988 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
30K_MP_C_Ter
DUF1572
Motif
Other DBs
NCBI-ProteinID:
CEN28188
UniProt:
A0A0D6DW66
LinkDB
All DBs
Position
I:1019756..1020757
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AA seq
333 aa
AA seq
DB search
MTVFDTLSQLSANNLPQFIMISGEDDDIISALKLQLMAKVSFDPSDLSQAYFDLSEADPD
LALEELESLPFFGDEMLVVFENVWELTTVKKSVLTENQLLRLEQFLDNPLASTRLIIICH
GKLDGKRRIVKKLKQIALHLEATTLKPNELSQYFVNKSGLQPAIVNFIIEKSNSHFATVG
QNIALVTTYADGRQVTLEDVEKAVPKSLADNIFDLTDLILKGKIVEARSLVTDLVLQGED
EIKLLAILTSNFRLYYQIKLLLDKQYTERQLIDYLKINPYRLKFLVTPARSRSKAFLAAA
MRYLIDTDFKIKSGQADKKFLMDMVLIRLSGIN
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgacagtatttgataccctttcccaattatccgccaataatctacctcaatttatcatg
atatcgggtgaagatgacgatattatttcggccttaaagctgcaactgatggcaaaagta
agttttgacccatctgacctatcacaagcctattttgatttatctgaggctgatcctgat
ttggccttagaagagcttgagagcttaccattctttggtgatgagatgctggttgttttt
gaaaatgtatgggagttaacaacggtcaaaaaatcagtattaacagaaaatcagttactg
agacttgaacagtttttagacaatcccttagcatcaacgagactgatcatcatctgtcac
ggcaaactagatggcaaacggcgtattgtcaagaaattaaaacagattgcccttcattta
gaagcaacgactttaaaaccaaatgaattaagtcagtattttgttaacaaatcaggctta
caaccggctattgttaacttcatcatcgagaaatcaaatagtcattttgcgacagtaggc
caaaatatagccttagtaaccacttatgctgatggtagacaggtgacacttgaagatgta
gaaaaagctgttccgaaatcattagcggataatatttttgatttaaccgacctgatttta
aaggggaaaattgtagaagcaagaagtttagtgacagacctcgtcttgcaaggtgaagat
gaaatcaagttactagccatcttaacgagtaattttcgcttatactatcaaatcaaactg
ttactggataagcagtatactgaacgtcagttgatagattacctaaaaattaatccttat
cgattgaaattcttggtaacacctgcacgtagtcgaagtaaggcgtttttagcagcagca
atgcgttatctgattgacacagattttaaaatcaaatctggtcaggcggataaaaaattt
ttaatggacatggtcttaattagattatccggcatcaattga
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