KEGG   Lactococcus piscium: LACPI_1017
Entry
LACPI_1017        CDS       T03909                                 
Symbol
rnjB
Name
(GenBank) Ribonuclease J 2 RnjB
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
lpk  Lactococcus piscium
Pathway
lpk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lpk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LACPI_1017 (rnjB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lpk03019]
    LACPI_1017 (rnjB)
Messenger RNA biogenesis [BR:lpk03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LACPI_1017 (rnjB)
SSDB
Motif
Pfam: RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Lactamase_B_6 BHD_3
Other DBs
NCBI-ProteinID: CEN28217
UniProt: A0A0D6DWW0
LinkDB
Position
I:1056372..1058114
AA seq 580 aa
MSNVKIVALGGVREFGKNMYVVEVDDVIFILDAGLKYPETEMLGVDFVIPDMSYLVENAD
RVAGVFLTHGHPDAIGALPYLLSEMAVPVFGSQLTVELAKIRIKEVDGSKKFDDFHIVDE
STEIDFGAAVISFFSTTHTIPESLGIVVGTENGNVVYTGDFKFDPAVGEGYKTNISRLAE
IGTQGVLALLSDSANGLTNLQSASESEISDKIFDTISDWDGRVIIASVAGNLARIQQVID
SAIKLGRYVAFTGQDLDLIVKTASDLGKLRIDDDKMIIDPKDINKYEDKELLILETGRMG
EPLKTLTDMATGRHRFVKIKEGDLVYTVTSPTISYETKVAKTENIVYRAGGIMKMLSSDL
RVSGHANSRDLQFLLDILKPKNLMPIQGEYRELQTHAEHAMEVGMLPENIFLAKRGEVIT
FNAEGNFEPNGVVSAENVMIDGSGVGDIGNIVLRDRKVLSEEGIFIAVVTISKHEKKIIS
KTKVHTRGFVYVKNSRNLMKEAAIKVDEKVKAYLAGDNFDWAEIKSEIRDTLGKFLYDQT
KRRPVVLPVVMEVRQNDFRQKRHVKPKKKVEKVEKTEKID
NT seq 1743 nt   +upstreamnt  +downstreamnt
atgagtaatgtaaaaatagtagctttgggtggcgtccgcgaatttggtaaaaatatgtat
gttgttgaagttgacgatgtcatttttattttggatgctggtttaaaatatccagaaact
gaaatgttaggtgttgactttgttataccagatatgagctatctggttgaaaatgcggac
cgagtggcaggtgttttcttaacacatggtcatccagatgctattggtgccttgccttat
ttgttaagtgaaatggcagtacctgtctttggtagtcagctaacagtagaactggcaaaa
atccgtatcaaagaagtagacggtagcaaaaaatttgatgattttcatatcgtggacgag
tcaactgaaattgactttggtgctgcagtgatttcattcttttctacaacacatacgatt
cctgaaagtctagggattgttgtcggtacagaaaatggtaatgttgtctatacgggtgat
ttcaagtttgatccagcagttggtgaaggctataagacaaatatttcacgtttagctgaa
atcggcacgcaaggtgtcttagcacttttaagtgattcggcaaatggcttgacaaatcta
cagtctgctagtgaatctgaaatctctgataaaatttttgatacgatttcggattgggat
ggtcgtgtcatcatcgcctctgtagcaggtaatctagcgagaattcaacaagttatcgat
agtgccatcaaactaggtagatatgttgcctttactggccaagatttagatttgattgtt
aaaacagcaagtgatttaggtaaacttcgaattgatgacgataagatgattatcgatcca
aaagacatcaacaaatatgaagacaaagagcttttgattttggaaacaggtcgcatgggc
gagcctttgaaaacattgacagatatggcaactggccgtcatcgttttgttaaaatcaaa
gagggggatttggtctatacggtcacaagcccaacgatttcgtatgaaacaaaagtagct
aaaactgaaaatattgtctaccgtgctggtggtatcatgaagatgctatctagtgattta
agagtttctggacatgcgaattcacgtgatttgcagttcttattagatattttgaaacca
aaaaatctgatgccgattcaaggtgaatatcgtgaactacaaacacatgctgagcatgct
atggaagttggcatgttacctgagaatattttcttggcaaaacgtggtgaagtgatcact
tttaatgctgagggcaactttgaaccaaacggtgttgtatcagctgaaaatgtcatgatt
gatggctctggtgttggtgatattgggaatatcgtcttaagagaccgtaaagtactgagt
gaagaaggtatttttatcgctgttgtcaccatatctaagcacgagaaaaaaattatcagt
aagacaaaagtacacacacgtgggtttgtctatgttaaaaattctcgtaatttgatgaaa
gaagcagccattaaagttgatgaaaaagtaaaagcttatttagctggagacaactttgac
tgggctgaaattaagtctgagattcgtgatacactcggtaaattcttatatgaccaaacc
aaacgtcgtccggttgtcttgccagttgtgatggaagtacgtcaaaatgatttccgtcaa
aaacgtcatgttaaacctaagaaaaaagttgaaaaagtagaaaaaacagaaaaaatagat
taa

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