Pseudolactococcus piscium: LACPI_1341
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Entry
LACPI_1341 CDS
T03909
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lpk
Pseudolactococcus piscium
Brite
KEGG Orthology (KO) [BR:
lpk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpk03016
]
LACPI_1341 (truB)
Enzymes [BR:
lpk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LACPI_1341 (truB)
Transfer RNA biogenesis [BR:
lpk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LACPI_1341 (truB)
Prokaryotic type
LACPI_1341 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
CEN28541
UniProt:
A0A0D6DX30
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All DBs
Position
I:complement(1411488..1412384)
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AA seq
298 aa
AA seq
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MTYNGILAIYKEAGMTSHDVVFKLRKILQTKKIGHGGTLDPDVTGVLPIAVGQGTRVVEF
MTEAGKVYEGQVTLGFSTETEDASGEVVERTPVTQVPSEADIDLAMAGFVGEIIQIPPMY
SAVKVNGRKLYEYARAGETVDRPERQVTLTEFVRTSDLVFDKNNQLLKFNFRVVCSKGTY
VRTLAVDLGAKLGYASHMSYLQRTASAGLKIADAFKLSEIEQLKAEDRLSEAFLPIEYGV
SDLEKVLLTAEQVKEISFGRFVTLTSDADIVAGFQEDRLIAILQKRDGKLYKPKKVMI
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgacatataatggtattttagcgatatataaagaagcgggcatgacgagtcatgacgtt
gtctttaagctacgaaaaatattgcagactaagaaaattggtcatggtggcacactggat
ccggatgtgacaggtgtcttaccgattgcagtcggtcaaggtacgcgtgttgtagaattt
atgacagaggctgggaaagtatatgaaggtcaagtcacactaggcttttctactgagaca
gaagatgccagtggtgaggtggtcgagcgtacgcctgtgacacaggtacctagtgaagct
gacattgaccttgccatggctgggttcgtcggtgagatcatacaaataccacccatgtac
tcggcagtcaaagtgaatggccggaaactctatgaatatgcgcgtgctggtgagacggtt
gatagaccagaaagacaggtcacactgacagaattcgtcagaacgtctgatttagtattt
gacaaaaacaatcaactccttaaatttaactttagggtggtttgcagtaagggcacttat
gtgagaacactagccgttgatttaggggcgaaacttggctatgcaagccatatgtcttat
ttgcaacggactgcatcagcaggcttaaaaatagcggatgccttcaagctgtcagaaatc
gagcagctgaaagcagaggatcgtttatcagaagcatttttaccaatcgagtatggtgta
tctgacttagaaaaagtgctacttacagcagaacaagttaaagagattagctttggtaga
tttgtgacattgacatcggatgctgatattgttgcagggtttcaagaagatcggttgatc
gcgattttgcaaaaacgggatggcaagctttataaacctaagaaagtgatgatatga
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