Pseudolactococcus piscium: LACPI_1747
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Entry
LACPI_1747 CDS
T03909
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lpk
Pseudolactococcus piscium
Pathway
lpk03410
Base excision repair
lpk03430
Mismatch repair
lpk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LACPI_1747 (recJ)
03430 Mismatch repair
LACPI_1747 (recJ)
03440 Homologous recombination
LACPI_1747 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpk03400
]
LACPI_1747 (recJ)
DNA repair and recombination proteins [BR:
lpk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LACPI_1747 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LACPI_1747 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LACPI_1747 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
ssDNA-exonuc_C
DHH
DHHA1
TPP_enzyme_N
Motif
Other DBs
NCBI-ProteinID:
CEN28947
UniProt:
A0A0D6DYB4
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All DBs
Position
I:complement(1857515..1859740)
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AA seq
741 aa
AA seq
DB search
MIIPTYDWQLNSDEPTAEFIKLVKKQKLDTLTAKILWKRQIRTADTLTSFLNPTLETLHD
PFLFYSMRRAVERIRQAIEMQEIILIYGDYDADGMTSASIMKTALDEIGAESLVYLPNRF
TDGYGPNLDVYKYFIENEGVGLIITVDNGVAGHEAIAYAQENGCDVIITDHHSLPETLPD
AYAIIHPQHPDGQYPFPDLAGCGVAFKVACALLEYVPSEMLDLVAIGTIADMMSLTDENR
TLVKFGLEILKSTERIGLEALIKIAGVDKHSLTEESIGFQIAPRLNALGRLDDPNPAIDL
LTGWDEAETQQIAEMIDQKNQERKEIVAKMLVEAESQLDDSPVQFIYQPGWHPGVLGIVA
GQLVQKTGKPIVMLTEEAGILKGSARSIPAFDIFSALSAHHDLFIAFGGHAQAAGMTFDL
TNLPAIKAVIAAFIAHQKLDMSQKAPLVLDDTIVLSDITLDTIKSLGKVAPFGQDNPKPI
FLIKDYQVVQSRAMGQQNAHLKLKVQQDKTQLEAVYFGQGMAALEFEQAAPDLAVTLSVN
TWNGNTSVQLMVVDAKVNGSQLIDLRNQQHQTAIPDDASVFTNENVEQEKLTQVLVVAET
PHDKASLDRLKKMVVSQDFTAVYFKNSIKQTYYLTGGGTHEQFAKFYKTIYQYPEFDVRY
KLADLADYLKIPLILLVKMVQIFEELAFVNIKDGVMTVNKEAKKREISESQIYQDLQVLV
QIQSVFALSPVGEIYEKLKEK
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgatcatacctacctatgattggcaacttaattcagatgaaccgacagctgaatttatt
aagttagtcaaaaaacaaaaattagatacacttacagccaagatcctttggaaacggcaa
atcagaacagcagataccctaacaagctttttgaatccaacactagaaaccttgcatgat
ccatttttattttacagcatgcgacgtgctgttgaacggattcgacaagcaattgagatg
caagaaattatcttaatttatggtgactatgatgcagatgggatgacaagtgcgagtatt
atgaagacagcactcgatgagataggtgctgaaagcttggtttatctgcctaaccggttt
acggatggctacggaccgaatttagatgtttataaatactttatagagaatgaaggtgta
ggcctgatcatcactgttgataacggtgttgcaggtcatgaagcgatagcttacgcccaa
gagaatggctgtgatgtcatcatcactgaccaccattctctacctgagacgctccctgat
gcatatgcaattatccatccccagcatccagatggccaatatccatttcctgatttggct
ggatgtggtgtcgcttttaaagtggcatgcgccttattagagtatgttccgtcagagatg
ttagacctggttgctattgggacgattgcagacatgatgtcactgactgatgaaaatcga
acgctggtaaaatttggtctggaaattctaaaaagtacagagcgtattggcctagaagcc
ttaatcaagattgcgggtgttgataagcatagcttaactgaggaatcaatcgggtttcag
attgcacctaggctaaatgcattggggcgccttgatgatccaaatcctgcaattgactta
ttgacaggttgggatgaggcagaaacgcaacaaattgctgagatgatcgaccaaaagaat
caagagcgtaaagagattgttgccaagatgttagtagaggccgaatcacagctagatgat
agtccagttcagtttatttatcaaccgggctggcatccaggcgttcttgggatcgttgcc
ggtcaattagttcaaaaaactggcaagcctatcgtcatgttaacggaagaagcaggtata
ctaaaaggatctgccagatctattccggcttttgatatcttttcagccctgtctgcgcat
cacgacttatttattgcctttggtgggcatgcgcaagcggctggcatgacctttgaccta
acgaatttacctgctattaaagcggtaattgcggcatttattgcacatcagaaactcgat
atgtctcagaaagcaccacttgttttggatgacacgattgtgctttctgatatcacgctt
gatacgattaaatcacttggcaaagtagcaccttttgggcaagataatcctaaaccaatt
tttttgataaaagattatcaagtggttcaaagtcgtgcaatggggcaacaaaatgcacac
ctgaaacttaaggtccagcaagataaaacacagctagaagctgtttattttggtcaggga
atggcagcacttgagtttgaacaagccgcacctgatctggcagtaaccttatcggtcaat
acgtggaatgggaatacatcagtacaattgatggtcgttgacgcaaaggttaacggaagt
cagctgattgatttgagaaatcaacagcaccaaacagcaattccagatgatgcatctgtg
ttcacaaatgaaaatgtcgaacaggaaaagctgacccaggtattagtggtcgctgagaca
cctcatgataaagctagtcttgatagactaaaaaaaatggttgttagtcaggacttcact
gcagtttattttaagaatagcatcaaacaaacctattacttgactggtggtgggacacat
gaacaatttgctaaattctataaaacgatttaccaatatccagaatttgatgtccgatat
aaactcgctgatttggctgactatttgaagataccgcttattttattagttaaaatggta
caaatttttgaagagttagcatttgttaacattaaagatggcgttatgacggtcaataaa
gaggcgaagaaaagagagatatctgagagtcaaatctatcaagatttacaagtgttagtt
cagatacaatcagtttttgccttatcaccagtgggtgagatctatgagaaattaaaggag
aaataa
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