Lactiplantibacillus plantarum WCFS1: lp_0480
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Entry
lp_0480 CDS
T00115
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase, delta subunit
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lpl
Lactiplantibacillus plantarum WCFS1
Pathway
lpl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lpl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
lp_0480 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpl03021
]
lp_0480 (rpoE)
03400 DNA repair and recombination proteins [BR:
lpl03400
]
lp_0480 (rpoE)
Transcription machinery [BR:
lpl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
lp_0480 (rpoE)
DNA repair and recombination proteins [BR:
lpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
lp_0480 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Patatin
Motif
Other DBs
NCBI-ProteinID:
CCC77977
UniProt:
Q88Z77
LinkDB
All DBs
Position
428432..429031
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AA seq
199 aa
AA seq
DB search
MELKQFDGQKKSELSLIEVAHAILSQHGDVMAFADLTNAVQSYLGKSDEEIRERLSQFYT
DLNIDGSFISLGDNMWGLRAWYPFESIDEAVIHTDDDEDEDRPKRKKVNAFLADAGDDDD
VIDYDDDDPEDDDNYDDDDDQDDDTDDSASSKYDELAGVDDTDDDVADETLPDGIEGQLS
ELNDDDDDDDYDDEDDESK
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
ttggaactaaaacaatttgatggacaaaaaaagtccgaattatctttaatcgaggttgct
cacgcgatcttatcacaacatggtgatgtgatggcttttgccgacttgaccaacgctgtg
caatcatatttaggtaaaagcgacgaagaaattcgggagcgtttatcacaattttatacc
gatcttaatatcgatggtagtttcatttcgctcggtgacaatatgtggggcctgcgtgca
tggtacccatttgaatccattgacgaagccgttattcatacggacgatgacgaagatgag
gatcggccaaagcgtaagaaggttaacgccttcttggccgatgccggggatgatgacgac
gtgatcgattacgatgacgatgatcccgaagatgacgataactacgatgacgatgatgat
caggacgacgatactgatgattcagcaagcagcaagtacgatgaacttgcgggtgttgat
gacacagacgacgatgttgctgatgaaacgttgccagacggtatcgagggtcaattatca
gagttaaatgatgacgatgatgatgacgactacgatgacgaagacgacgaatcgaaataa
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