Lactiplantibacillus plantarum WCFS1: lp_0569
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Entry
lp_0569 CDS
T00115
Symbol
tex
Name
(GenBank) transcription accessory protein, contains S1 RNA binding domain
KO
K06959
protein Tex
Organism
lpl
Lactiplantibacillus plantarum WCFS1
Brite
KEGG Orthology (KO) [BR:
lpl00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
lp_0569 (tex)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
HHH_3
Tex_N
HHH_9
S1
YqgF
HHH_7
S1_RRP5
T2SSK
SBP_bac_5
Rab5-bind
Motif
Other DBs
NCBI-ProteinID:
CCC78055
UniProt:
F9UL40
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Position
526773..528944
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AA seq
723 aa
AA seq
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MDNQILTLVNQTLTKFKPQQIKAVLGLMDEGNTVPFIARYRKERTGNLDEVEIREIKDNY
DRLASLESRKADVMKLIAEQDHLTPALKQAIEKADKLQDVEDLYLPYKQKRRTKATIAKD
AGLEPLAAWLLRFPASGIQEHAAQFVNEAQDITDANTALAGAHEILAEAFGDNAGLRNWV
RNYTRDRGLLVAKVKPKGKAADEQGVYQQYYDFNSPIKQMVPYRVLAINRGEAEKVLKVS
IDVDRAGIDRYCHFRFIGQHHGPAIELVEAAYQDAYKRFIGPAIERELRNELSAAANEQA
IKVFGDNLYHLLMQAPLKGRVVLGFDPAYRTGCKLAVMDANGKFLDKLVIYPHKPAPTAK
REAAAGEFKAFLEKYHVEMIAIGNGTASRESEEFVAQVLKTMTRPVYYVIVNEAGASVYS
ASAKARAEFPELHVEQRSAISIGRRLQDPLAELIKIDPKSVGVGQYQHDVPQKELTTQLD
TVIETAVNQVGVNLNTASSELLTHISGLSSTIAQNVITYRDENGEFTSRPQLKKVPRLGP
KAYEQAVGFLRIIDGKNVFDNTDIHPESYPAAKALLAAAGLKTTDVGTTKAQQLNQLDLA
QLATSTGVGELTLKDIISSLQKPGRDVRDTMPAPLLRQDVLKMSDLKPGMQLQGTVRNVV
DFGAFVDIGVKQDGLVHVSKLTDKFLKDPRQAVAVGDIVTVWVEEVDEQRQRIALTMIAP
AEA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggataatcagattttaacgttagttaatcaaacgctgacgaagtttaaaccgcaacag
atcaaagcggttctcggactcatggacgaaggcaacaccgttccgtttatcgcacggtat
cgaaaggaacgtaccggtaacttagatgaagttgaaattcgcgaaattaaagataactat
gatcggcttgcgagtctagagagtcgtaaggcagatgtgatgaagttgatcgctgaacaa
gatcacttgacgccggctttaaagcaagccattgaaaaagctgacaagttgcaagatgtc
gaagatttgtacttaccgtacaaacagaagcgacgtacgaaggcaacgattgcgaaagat
gctggactggagccgttagcagcttggttattacgttttccggcaagtggtattcaggaa
cacgcggcgcagtttgtgaacgaagcgcaggacatcacagacgcgaataccgcgttagct
ggagctcacgaaatcttggctgaggcctttggtgataatgccggtttacgaaactgggtc
cggaattatacgcgtgaccggggcttactagtcgcaaaagtgaaacccaagggtaaagca
gccgatgaacaaggtgtttaccaacagtattatgattttaatagtcccatcaagcagatg
gtaccgtaccgggtactggctatcaaccgtggggaagccgaaaaagtattgaaagtcagc
attgatgttgatcgtgctggaattgaccggtattgtcattttcgttttattggtcagcac
cacggcccagcgattgaactagtagaagctgcttatcaggatgcctacaaacgctttatt
ggcccggccatcgaacgtgaacttcgcaacgaattgagtgcggctgccaatgaacaggcc
atcaaagtctttggcgataatttgtaccacttattaatgcaggcaccattaaaaggtcgc
gtggtattagggttcgaccccgcttaccggacggggtgtaaattagccgtgatggatgcg
aatggtaagttcttagataagcttgtgatttatccacacaaaccagccccaactgccaaa
cgggaagctgctgcgggtgagtttaaagcctttttagagaagtatcatgttgaaatgatt
gcgattggtaacgggacggcttcccgcgaatccgaggagtttgtggcacaggtattgaag
actatgacccgaccggtttattatgtcatcgttaacgaagccggggcttccgtgtactct
gctagtgctaaggcgcgtgctgaatttcctgagctacacgttgaacaacgtagtgcgatc
agtatcggccggcgactacaagacccactggcagaattgatcaaaatcgatccgaagtca
gtgggagtggggcaataccaacacgatgtgccccagaaggaattgacaacgcagctagat
acggtgattgagaccgcggttaaccaagttggggtcaatttgaataccgctagttcggag
ctattgacgcatatttcggggctatccagcacgattgcccaaaatgtgattacttatcgg
gatgaaaatggcgaattcacgagccgaccacaattgaaaaaagtgccgcggttgggaccg
aaagcttatgaacaagcggtcggcttcctgcgaatcattgacggcaagaatgtttttgat
aacacggatattcatccagaaagttatcccgcagccaaagcgttattggcagcggctgga
ttgaagacgacggacgttgggacgactaaagcccaacagttgaatcaattagatttagcg
caacttgcgaccagcaccggtgtcggtgaactgaccttaaaggatattattagtagtttg
caaaagcccgggcgtgatgttcgtgatacgatgcccgcaccgttactccggcaagacgtt
ttaaagatgagtgatctaaaaccagggatgcagttgcaaggaaccgtacgcaacgtggtc
gactttggggcgtttgtggatattggtgtcaagcaagatggcctcgtacatgtctccaaa
ctaacggataagttcttgaaagatccgcgtcaggcggtggcagttggcgacatcgtaacg
gtgtgggtcgaagaagttgatgaacagcggcagcgcatcgctttgacgatgattgcaccg
gctgaagcataa
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