Lactiplantibacillus plantarum WCFS1: lp_0698
Help
Entry
lp_0698 CDS
T00115
Symbol
dnaX
Name
(GenBank) DNA-directed DNA polymerase III, gamma/tau subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lpl
Lactiplantibacillus plantarum WCFS1
Pathway
lpl03030
DNA replication
lpl03430
Mismatch repair
lpl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
lp_0698 (dnaX)
03430 Mismatch repair
lp_0698 (dnaX)
03440 Homologous recombination
lp_0698 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpl03032
]
lp_0698 (dnaX)
03400 DNA repair and recombination proteins [BR:
lpl03400
]
lp_0698 (dnaX)
Enzymes [BR:
lpl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
lp_0698 (dnaX)
DNA replication proteins [BR:
lpl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
lp_0698 (dnaX)
DNA repair and recombination proteins [BR:
lpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
lp_0698 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_30
AAA_22
AAA_5
AAA_19
AAA_24
TIP49
AAA_16
AAA_7
AAA_assoc_2
AAA_14
DnaX_C
Sigma54_activat
PIF1
AAA_2
Rad17
Mg_chelatase
DUF815
AAA_18
TolA_bind_tri
nSTAND3
RNA_helicase
Viral_helicase1
DUF6547
AAA_28
Clathrin
Motif
Other DBs
NCBI-ProteinID:
CCC78173
UniProt:
F9ULT4
LinkDB
All DBs
Position
642982..644679
Genome browser
AA seq
565 aa
AA seq
DB search
MYRALYRVWRPQRFDEIVGQQMITQTLKNAIMTHQTSHAYLFTGPRGTGKTSAAKIFAKA
INCHHLVDGEPCNECETCTAITKGQLNDVIEIDAASNNGVEEIRDIRDKAKYAPTQADYK
VYIIDEVHMLSTGAFNALLKTLEEPPANVIFILATTEPHKIPLTIISRTQRFDFRRITAK
DSYDRMVYILNEKDVTYDEKALRVIAAAAEGGMRDALSILDQVISFGDNTVTLDDALMVT
GSVTKQLLANYVSEVTDHDTKPALETMRQILQEGKDANRFIEDLISYTRDVLLYQQAPEM
VDSVAMGEDDQQFEAFAKQIDAEVLYQMVKTLNDIQQQMRFTTHPDVYLEVLTVKLAQLD
GQAAVQPVAAATVNPEDPTVHKLAQQVEQLQSEVKTLRSQGGSITKPAPAKPRSSNGPVV
KKVNVSQIYPILGAATKNDLIKVRDVWTDLMNILSVTQRALMHVAQPVAASSEGVVVAFD
YAFVYQKAIDDQTLIDALGNGLDRLMGEAPKIVCVPKEQWPQIRKDYLATHQPGGATSEQ
QAPAKEPVVEEAKNMFGDLVEVQPD
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgggcactatatcgggtttggcgtccccaacgctttgatgagattgtcgggcaa
cagatgattacccagacactaaaaaatgccattatgacccaccagacgagtcatgcgtat
ctgtttaccggtccccggggaactgggaaaacgtcggcagcaaagatttttgccaaggca
attaactgtcaccatcttgttgatggggaaccttgcaatgaatgtgagacttgtacggcg
attaccaaggggcaactaaatgatgtcatcgaaattgatgcggcttctaataatggtgtg
gaagagattcgtgatattcgggacaaagcgaagtatgctccaacgcaagcggactataaa
gtctacattattgatgaagttcatatgttatcgactggcgcgtttaatgcgttgctcaaa
acgctagaagaacccccggctaacgttatatttatcttagcgacaacggagccccataag
attccattaacgattatttcacggacgcaacggtttgattttcggcggattacagctaag
gatagctacgatcggatggtgtacatcctcaatgagaaggatgtgacctatgatgaaaaa
gcgctacgcgtcattgcagcggctgctgaaggtggaatgcgggatgctttaagtattctg
gatcaagtaatttcgtttggagataacacggttacgttggatgatgcgttaatggtgacg
ggaagtgtgaccaagcagttgctggctaactatgtcagtgaggtcaccgaccatgatacg
aagccggcactagagacgatgcgacaaatcttacaagaaggtaaagatgcgaaccgtttc
attgaagatttgatcagttatacgcgtgacgtgttactctatcaacaggcccctgaaatg
gtcgatagtgtggcgatgggcgaggatgatcaacaatttgaagcatttgccaagcaaatc
gatgctgaagtcctgtatcaaatggtcaagacgttgaacgatattcaacaacaaatgcgg
ttcacgacgcaccccgacgtttatttagaagtgttgacggtcaagctagctcagttggat
ggtcaagcggccgttcaaccggtagctgcggcaacggtcaatcctgaagatcccactgtg
cataaactggcacaacaagttgaacagttgcaaagcgaggtcaaaacgttacgttctcaa
ggtggtagtatcactaaacctgcaccggctaagccgcggtcgagtaatggcccggttgtt
aagaaggttaatgtcagtcagatttatcctattctgggagcggcaacgaagaatgatctc
attaaggtgcgcgatgtttggactgatttgatgaatattttgagtgtgacgcagcgggcc
ctaatgcacgtggcccaaccagttgcggccagttcagaaggtgttgtggttgcgtttgac
tatgcgtttgtttatcaaaaagcgattgatgaccagaccttgatcgatgcactcggaaat
ggtttggatcggctgatgggagaggcacccaagattgtctgtgtgcctaaagaacagtgg
ccacaaattcgtaaggattatttggccactcaccagccaggaggtgcaacatcagagcaa
caagcaccggccaaagaaccggtcgttgaagaagctaagaatatgttcggtgatttagtt
gaagtacagccggactaa
DBGET
integrated database retrieval system
