Lactiplantibacillus plantarum WCFS1: lp_0806
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Entry
lp_0806 CDS
T00115
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lpl
Lactiplantibacillus plantarum WCFS1
Pathway
lpl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
lp_0806 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpl03400
]
lp_0806 (ung)
Enzymes [BR:
lpl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
lp_0806 (ung)
DNA repair and recombination proteins [BR:
lpl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
lp_0806 (ung)
Prokaryotic type
lp_0806 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
UPA_SH3BP4
Motif
Other DBs
NCBI-ProteinID:
CCC78265
UniProt:
Q88YG1
LinkDB
All DBs
Position
747475..748167
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AA seq
230 aa
AA seq
DB search
MKAFIHTDWWDVLKPEFEKPYYHQLHEFLKNEYRTKNIHPDMYNIFQAFEWTPFADTKVV
ILGQDPYHGPGQAHGLSFSVLPGVAVPPSLVNIYKELQDDVGCTPVNHGYLESWAKQGVL
LLNSVLTVQNGVAFSHAGKGWERLTDVAIQRLSERSTPVVFILWGKAARSKIKLIDTQTN
VVLQAPHPSPLSAYRGFFGSKPFSKTNIALTSFGEQPINWQLPEHVNLEH
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgtttattcacacggactggtgggacgtcttaaaaccagagtttgagaagccg
tattaccaccaattacacgaatttttgaaaaatgaataccgaacgaaaaatattcaccca
gatatgtataatatttttcaggcctttgaatggacgccatttgctgacacgaaggtcgtt
attttaggtcaggatccgtatcatggtcctggtcaggcacacggactgagtttttcagtg
ttaccgggcgtggcagtgcccccatcactagtcaatatctataaagaattgcaagatgat
gttgggtgtacgcccgtcaaccacggttacttggaaagttgggccaagcagggagtcttg
ttattgaactccgtgctgactgttcaaaatggtgtggccttttcacacgctggtaagggc
tgggaacgacttacggacgttgccattcagcgtttatcggaacgatcgacgccggttgtc
tttatcttgtggggtaaggcggctcggtccaagattaagctgattgatacccagacgaat
gtcgtgctacaagcacctcatccgagtccgctttcagcttatcgcggattctttgggtcc
aaaccattttcaaaaacgaacattgcgttaacatccttcggcgaacagccaatcaattgg
cagttaccagagcacgtcaatcttgagcattaa
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