Lactiplantibacillus plantarum WCFS1: lp_1076
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Entry
lp_1076 CDS
T00115
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lpl
Lactiplantibacillus plantarum WCFS1
Brite
KEGG Orthology (KO) [BR:
lpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpl03016
]
lp_1076 (truA)
Enzymes [BR:
lpl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
lp_1076 (truA)
Transfer RNA biogenesis [BR:
lpl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
lp_1076 (truA)
Prokaryotic type
lp_1076 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
CCC78482
UniProt:
Q88XU9
LinkDB
All DBs
Position
978088..978876
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AA seq
262 aa
AA seq
DB search
MTTRYKVVLAYDGTNFAGFQRQPHQRTVEQVVTKAVNKMAKDPVEPIVIYGAGRTDAGVH
AFGQTLHFDLPYEINPEGVRRGLNSMLPMDTIVKAVSIVPNDFHARYDTVGKRYWYRAYQ
NEFVDPFKRHYTGHFKFAADIDRIQQAIGDLEGRHDFSTFVASGSQAHDHVREIYSAKAW
ALPDEREIQFEFCGSGFLYNQVRIMVAVLMEIGQGRRAVDCIPALLAAKDREQARGTAPA
AGLYMKKVYYEQNELQADLIKY
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacgcggtataaagtagttttagcatatgacggcaccaattttgcgggttttcaa
cgccagccacaccagcgaactgtcgagcaggtcgtcactaaggcggtcaataagatggcg
aaagatcccgttgaaccgattgtgatctacggcgcgggccgaacggatgctggtgtacat
gcgtttggacagacgttgcattttgacttgccgtacgaaattaatccagaaggggttcgg
cgcggcctgaacagcatgttaccgatggatacaatcgtaaaggccgtttccattgtgccg
aatgattttcacgcgcgttatgatacggtcggtaagcggtactggtatcgggcctatcaa
aatgaatttgtagatccatttaaacggcactatacggggcattttaagttcgctgcggat
atcgaccgaattcagcaagccatcggtgacttagaaggacggcacgatttctcgaccttc
gttgcgtccggttcacaagcacatgatcatgttcgtgagatctattcagccaaagcgtgg
gccttgccggatgaacgcgaaattcagtttgaattttgcggtagtggttttttatataac
caggttcgaatcatggtggctgttttgatggaaattggtcagggccggcgcgcagttgac
tgtattccagcgttactagcggctaaggaccgtgagcaagcgcggggaacggctcccgcg
gctggactttatatgaaaaaagtgtattatgaacaaaatgaattacaagctgatttgata
aagtattga
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