Lactiplantibacillus plantarum WCFS1: lp_1144
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Entry
lp_1144 CDS
T00115
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lpl
Lactiplantibacillus plantarum WCFS1
Pathway
lpl03420
Nucleotide excision repair
lpl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
lp_1144 (pcrA)
03430 Mismatch repair
lp_1144 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpl03400
]
lp_1144 (pcrA)
Enzymes [BR:
lpl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
lp_1144 (pcrA)
DNA repair and recombination proteins [BR:
lpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
lp_1144 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
lp_1144 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
MSSS
Motif
Other DBs
NCBI-ProteinID:
CCC78534
UniProt:
F9UMU5
LinkDB
All DBs
Position
1038557..1040824
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AA seq
755 aa
AA seq
DB search
MSKESLLAGMNDKQQEAVLDTEGPLLIMAGAGSGKTRVLTHRVAYLIEEQGVNPWNVLAI
TFTNKAAREMRERVGKLLGESAQEVWVSTFHALCVRILRRDIEQIGYNRAFTIAGTSEQR
TLVKRILTEQNIDSKKFDPRSILSAISNAKNDLQTPEMYKESAASPFESVVADVYLQYQR
ELAADQAVDFDDLIMLTIQLFKQNPETLAWYQNKFHYIHVDEYQDTNNAQYTLVNLLADK
YKNLCVVGDADQSIYGWRGANMENILDFEKDYPQADTVMLEQNYRSTKTILSAANAVINN
NSTRRPKKLWTENEPGDKISYYRGQSESDETHFVIAKIQESMQQDKMDYGDFAILYRTNA
QSRVMEESLVKANIPYTMVGGNKFYDRKEIRDVLSYLTLAVNDQDSMNFERVVNEPKRGI
GQTSVEKLRLFADEAGYSMLEAASNVDMANGISARAKGALAKFAATMNELRAMREYLSVT
DLTQEILDRTGYMKALKDAKATKSLEAQARIENIEEFLSVTKQFDDSYQPEDEDSDKFVD
FLADLALVSDVDNVEEEPQAVTLMTLHAAKGLEFPVVFLIGMEEGIFPLSRAMMDEDELE
EERRLAYVGITRAEKKLYLTNAYSRMLYGRRQNNPASRFVEEIEPELLKNENTLDGASST
GPKVPFGADRERRAFTPSYKKNPVGTRATVKKASGTGADKNSWSIGDKVKHRKWGTGTVV
KVSGAGEDAELDIAFKSEGIKRLLAAFAPIQKVQD
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaaagaaagcctattggcaggaatgaatgacaagcagcaagaagccgttttagac
acagaaggaccgctactaattatggccggtgcgggctcggggaagacccgtgtattgacg
caccgggtagcttatttaattgaagagcaaggggtcaacccctggaatgttttagcgatt
acgtttacgaacaaggccgcacgcgaaatgcgtgaacgggttggtaagctgttaggtgaa
tcggcgcaggaggtctgggtctcaacgttccatgccctgtgtgtccgaattttacgacgt
gacattgaacaaatcgggtataaccgagcgttcacaatcgccggcactagcgagcaacgg
accttagtcaaacgaatcttgacggaacaaaatatcgattcgaaaaaatttgatccgcgg
tcaatcttatccgcaatttcaaatgcgaaaaatgacttacaaacgccggagatgtataaa
gaatcggctgccagtccctttgagagtgtcgtggcagacgtttatttgcaataccaacgt
gaattagcggctgatcaagccgttgactttgatgatctgattatgctgacgattcaatta
ttcaagcagaatcctgaaacgctggcgtggtaccaaaacaaattccattatattcacgtg
gatgaatatcaagatactaataatgcacagtatacgttagtcaacttgttagctgacaaa
tataaaaatttatgtgtagttggggatgcggatcaatctatctatggttggcggggggcc
aacatggaaaatattctcgatttcgaaaaggattatccgcaagctgacacggtgatgttg
gagcaaaactatcgttcgaccaagacaattttgtcggcggctaatgcagttattaacaat
aattcaacgcggcggccgaagaaattatggactgagaatgaaccgggtgacaagatttct
tattatcgtggtcagagtgaaagtgatgaaactcactttgtcattgccaagattcaagaa
agcatgcagcaggacaaaatggactacggcgattttgcgatcctttatcggacgaacgca
caatcccgggtaatggaagagtcactcgttaaggcgaacatcccttatacaatggtcggt
ggtaataagttctatgaccgtaaagaaattcgggacgtcttatcctacttgactttggca
gtgaacgatcaagattcaatgaactttgaacgggtcgttaatgaacctaagcgcggcatt
ggtcaaacgagtgttgaaaaattgcggttgttcgcggatgaagcgggttattccatgttg
gaagcagctagcaatgttgacatggctaatggcatttcagcacgagcgaagggtgcttta
gcgaagtttgcagcgacgatgaatgaattgcgcgctatgcgggaatacttatccgtgacg
gatttaacacaagagattcttgaccgaacgggttacatgaaggcgttgaaagatgctaag
gcaacgaaatcgttagaggcacaagcccgtatcgaaaacattgaagaattcttgtctgtc
accaaacaattcgatgatagttatcaacctgaagatgaagatagtgacaaattcgtggac
ttcttagcggatttagcactggtttcggatgtggataacgttgaggaagaaccccaagcc
gtgacgctgatgacgttacatgcagcgaaggggctagaatttccggttgttttcttgatt
gggatggaagaaggtatcttcccactgtcccgggcaatgatggatgaagacgagctggaa
gaagaacggcggttagcatacgttgggattacgcgggctgagaagaagctgtacttgacc
aatgcatactcacggatgctttacggtcggcggcagaataatccggcttcccgtttcgtt
gaagaaatcgaaccagaattactcaaaaatgaaaatacgttggatggtgcaagtagcact
ggtcctaaagtcccatttggtgcggatcgtgaacggcgtgcttttacaccttcatataaa
aagaatccagtggggacgcgggccacggtcaagaaggctagtggcacgggtgctgacaag
aatagttggtcgatcggtgataaagtcaagcatcgtaagtggggaaccggaacggtcgtg
aaggtctccggtgctggtgaagatgctgaactagacattgctttcaaatctgaaggaatc
aagcggttattagccgcatttgcaccgatccaaaaagtacaggactag
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