Lactiplantibacillus plantarum WCFS1: lp_1151
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Entry
lp_1151 CDS
T00115
Symbol
rumA
Name
(GenBank) 23S rRNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lpl
Lactiplantibacillus plantarum WCFS1
Brite
KEGG Orthology (KO) [BR:
lpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lpl03009
]
lp_1151 (rumA)
Enzymes [BR:
lpl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
lp_1151 (rumA)
Ribosome biogenesis [BR:
lpl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
lp_1151 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
TRM5-TYW2_MTfase
Methyltransf_15
Methyltransf_25
Cons_hypoth95
MTS
PrmA
Methyltransf_11
RrnaAD
DOT1
DUF7642
UPF0020
Methyltransf_12
N6_N4_Mtase
Methyltransf_32
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
CCC78541
UniProt:
Q88XP4
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All DBs
Position
1048761..1050134
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AA seq
457 aa
AA seq
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MKVNLPVHKGEVLDVTIMDLTYQGMGVAKVDNYPIFIENALPEEKITVKVTKTTKNFAFG
DVEKINQVSPHRVNPKGRVYRQTGIAPLQHLEYSEQLKFKQHQVAELFAKVHMDDVEVLP
TIGMANPTQYRNKAQVPVRQVQGQLTTGFYKKNSHQLMPIEDYYIQDPAIDKAIVVVRDI
LRKYHEAAYDEFHHSGTIRTIMVRRGYYSHEMMVVIVTRTKHLPMADVVTQEIQAALPEV
VSVIQNVNSKKTNVILGPVNNVLAGKATIDDQLLGLTFAISAQSFYQVNPQQTEKLYQLA
IDQAGLTGNETVIDAYSGIGTISLTMAQHAKQVYGVEIVPAAIDNARQNADKNGITNATF
VLDSAEKAMAKWQADGVKPDVIVVDPPRKGLDADFIKSAGEMAPKRVVYISCNPSTLVRD
VQRFAEYGYHISAPVQPVDQFPQTPHIESVTVLEREQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttaatttaccagtgcacaagggtgaagttttagacgtcactatcatggattta
acctatcagggtatgggtgttgctaaagtcgataattacccaatctttatcgaaaatgca
ttgccagaagaaaaaattacggtcaaggtcacgaagacgacgaagaactttgcgtttggt
gatgtggaaaagattaaccaagtgagtcctcatcgggttaatcctaaagggcgcgtttat
cgtcaaaccgggattgcaccactacaacacttggaatacagtgaacaattgaagtttaaa
cagcaccaggtggccgaattatttgcaaaggtccacatggatgatgtcgaagttttacca
acgattggtatggccaacccgacgcagtatcggaacaaggcccaagtacccgtacgacaa
gtccaaggacaactaacgactggtttttacaagaagaacagtcatcaattgatgccaatt
gaagattattatattcaagatcctgcaattgataaggctatcgtggtagttcgcgatatt
ttacggaaatatcacgaggcagcctacgatgaattccatcatagtgggacgattcggacg
atcatggtacggcgtgggtattacagtcatgagatgatggttgttattgtgacgcgaacg
aaacacttaccaatggctgacgtggtcacacaagagattcaagcagcgttacctgaagtt
gtcagtgtgattcaaaacgttaattctaagaagactaacgtgatcttagggccagttaac
aacgtgttagctggtaaggccactatcgatgatcagttactgggcctgacattcgccatt
tcagcccagtccttctatcaagtgaacccacaacagaccgaaaagctttatcagttagcc
attgatcaagctggtttgacgggtaatgagacggtgatcgatgcttattccggtatcgga
acgatttcgttaacgatggcccaacatgccaagcaagtgtatggtgttgaaatcgtgcca
gcagccatcgataacgcacggcagaatgcggataagaatggtattacgaacgcgaccttt
gttttggatagcgctgaaaaagccatggctaaatggcaagcagatggcgttaagccggac
gtgatcgtcgttgatccgccacgtaagggcttggacgccgactttatcaagagtgccggt
gaaatggcgcctaaacgggtggtttacattagttgtaacccatcaaccttagttcgagac
gtccaacggtttgcagaatacggctaccatattagtgccccggtccaacccgtggaccag
ttcccacaaacaccacatattgaatcggtaacggtgttagaacgcgaacaataa
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