Lactiplantibacillus plantarum WCFS1: lp_1509
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Entry
lp_1509 CDS
T00115
Symbol
fpg
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lpl
Lactiplantibacillus plantarum WCFS1
Pathway
lpl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
lp_1509 (fpg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpl03400
]
lp_1509 (fpg)
Enzymes [BR:
lpl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
lp_1509 (fpg)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
lp_1509 (fpg)
DNA repair and recombination proteins [BR:
lpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
lp_1509 (fpg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
CCC78835
UniProt:
Q88WV4
LinkDB
All DBs
Position
1381158..1381982
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AA seq
274 aa
AA seq
DB search
MPELPEVETVRRGLNRLVSGATIASIEVFWPKIINNDVDSFKQRLANQTIQTIDRRGKYL
LFRFSNGLTMVSHLRMEGKYNVVPRGEDQGKHTHVIFHLTDDRDLLYNDTRKFGRMTLVP
TGEENTVAGLRTIGPEPVAEQLTLAYMTATFGKSKKMIKPLLLDQSKIAGIGNIYADETL
WMSKIHPMRPANSLTTDEIATLRQNIIDEMAMAIKGHGTTVHSFSTAFGEAGQFQNHLHV
YGREGEPCERCGTIIEKIKVAQRGTHFCPLEQRL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattacctgaagttgaaactgttcgtcgcggcttaaatcgtctggttagcggg
gcaacgattgctagtatcgaggttttttggccgaaaattattaataatgatgtcgatagt
ttcaaacagcgtttagccaaccaaacgatccagaccattgatcggcgggggaagtattta
ttgtttcgctttagcaatggtctgacgatggtgtcgcatttgcggatggaaggcaagtat
aatgttgtaccgcgtggtgaagatcaaggtaaacacacgcacgtgatcttccatctgacc
gatgatcgtgatttactgtacaacgatacgcgtaagttcgggcgaatgacgctcgtgccg
accggtgaagaaaacacggtggcgggattgcggacaattggcccggaacccgttgctgaa
cagttaacactggcttatatgacggccacttttggcaagtcgaaaaagatgatcaagcca
ctattgttggatcaaagtaagattgcgggcattgggaatatttacgcggacgaaacgcta
tggatgagtaagattcatccaatgcggcctgctaattcactaaccactgatgagattgca
acattgcgccaaaacattattgatgaaatggcgatggcaattaaaggtcacggcaccact
gttcattcattttcaacggcatttggtgaggccggtcagtttcaaaatcacttacacgtc
tatggtcgtgaaggggagccttgcgaacggtgtggcacaattattgagaaaatcaaagtg
gcacagcgagggacccatttttgcccgttagaacaacggttgtag
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