Lactiplantibacillus plantarum WCFS1: lp_1548
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Entry
lp_1548 CDS
T00115
Symbol
sbcC
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lpl
Lactiplantibacillus plantarum WCFS1
Brite
KEGG Orthology (KO) [BR:
lpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpl03400
]
lp_1548 (sbcC)
DNA repair and recombination proteins [BR:
lpl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
lp_1548 (sbcC)
Archaeal homologous recombinant proteins
lp_1548 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
nSTAND3
RabGGT_insert
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CCC78869
UniProt:
F9UNT0
LinkDB
All DBs
Position
complement(1414154..1417339)
Genome browser
AA seq
1061 aa
AA seq
DB search
MKPVYLAMNYFGPHEHSIIDFSKLESTPIFLISGDTGAGKSTIFDAMTFALFGSTTNDGT
DGRAAKEMRSQFAPADQPTSVTFYFEQGNQLYKIARSPEQYLAKKKGSGLTKKNSTAKLA
VVDHVGGVEIESIATKPADVGPEITTILNLTADQFKKIILLPQNDFSEFLKSKTTDKEKI
LKKIFGTQLYSDFTAELKAEYQTASKTGDQFVADLRVALASATWNDEEQAQLQAVPDNQK
IPLLRAFVTTRQSAFDQAQQTTSKINRSVKAAETTYQQARDRQQQFDRLTQAQADYQTKV
EEQTPAITIAKQQLHALTWAQPLQATMQALTQQTRDQKQLTLDQQAAMDNVQQAQDDYRQ
AQAAVQQLHDQSEANHQHQQRLEQLATLIPQAQRVESLIAQLAKLKPSVADLKATFEQHQ
TVIKTLTAKITTQQANLPSIDDLHATKDLLIKQREQFVDTLTPLDSQWRGAQQEQQRVTK
QLTDLRAQLASDEQNQHNAQVQFEQQRGQRQSLMIAQLQQELVDGQPCVVCGSTDHSQMP
VTTIVANEADLRQSMQAVDDAQNALAAANKQVEATQQRVEQAEKEVDQATQQVTTAQTQL
TSTYQQLIETNGLALKSPYDLTAVRAFFAEQLATITKKLEAAQRVVQAIEKYTAELEAQQ
KQAQQTELQLGEQRALLRNKTADLTVAQAAIGTDLQVTSADLLAEKAHLNQIVATYQQRL
EAAQATVQTSQLTLSKHQTKLDDLNDRLKTTQATRTQLEQTIAQALAAPEAPTHDQTVLE
NWLEELANGRLTALQVQIATYRQDKERLTTEIKQLQTALTNVERPNITGIQAQLADLQAH
KDRALQSQTVAEQALTDAQSCLEKVQQIMHQQGTFAKRFAEITSLYNIMTGKDGNDHKLK
LETYVVQNYLQRVLNYANDHFINLLSNNRYTFELAAEASDNRSDHGLDINVYDNETGNSR
SSNTLSGGETFIAALSIALSLSEVVQSSANGVQIDALFVDEGFGSLDDETLEKAMQALET
IGENRMVGVISHIESMKRTIGQQVLIKKMGDGRSTVRLISK
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacccgtttatttagccatgaactattttggcccccacgaacattcaattattgat
tttagcaagctagaaagtaccccgatttttctaattagtggtgatactggggccggtaaa
tcaactattttcgatgccatgacttttgccctctttggcagtacgacgaatgatgggacg
gatggtcgggcagccaaagagatgcgcagtcagttcgcccccgctgaccaaccgacaagc
gtcaccttctactttgagcaaggcaatcaactctataagattgcgcgctcccctgaacaa
tacttagctaagaaaaaaggatctggactgacgaaaaagaatagtacggccaaattagct
gtcgttgatcacgttggtggcgtggagattgagagcattgcaaccaagccggccgacgtt
ggtcccgagatcacgaccatcttgaatttgactgccgatcaatttaaaaaaatcattcta
ctcccccaaaatgacttttcggaattcttaaagtcaaaaacgactgacaaggaaaaaatt
cttaaaaagatttttggaacgcaactttattcagactttactgcggaacttaaagcggag
tatcaaaccgccagcaagactggtgatcagtttgtcgccgatttgcgggtcgcactagcc
tcagcaacttggaatgatgaggaacaggctcaacttcaagcagttccggacaatcaaaaa
attccactactacgagcatttgttacgacgcgtcaaagtgcttttgaccaagcacagcaa
acgactagtaaaatcaatcggtctgttaaagcggccgaaacgacctaccagcaagcacgc
gatcgccaacaacaatttgaccggctcacacaggcgcaagctgattatcaaactaaagtt
gaagaacaaacaccggcaattaccatagccaagcaacagttgcacgcgttaacttgggcc
cagcccctacaagccaccatgcaagccctcactcaacaaacacgtgaccaaaagcaattg
acacttgaccagcaagcagctatggataacgtgcaacaagcgcaggacgactatcgccaa
gcgcaagctgcagttcaacaattacatgaccaaagtgaagctaaccatcagcaccagcag
cgcttggaacaattggccacgttgattccacaagcgcaacgcgttgaaagtctcatcgca
cagctcgcaaagctcaagccgagtgtcgctgatctgaaggcgacttttgaacagcaccaa
accgtaataaagacattaacagccaaaatcaccacccaacaagcgaacttgccatctatt
gatgacttacacgccactaaggatttgctgattaaacaacgagaacagttcgtcgacacc
ctgacaccacttgatagtcaatggcgaggtgcgcaacaagaacagcagcgcgtcaccaag
caactgactgatttacgggcgcagcttgccagcgatgaacagaatcagcacaatgcgcaa
gtccaatttgaacaacaacgtggtcaacgccaaagcttaatgattgcccaattacaacaa
gaactcgttgacggccagccctgcgtggtctgtggatcaaccgatcattcacagatgccg
gtcacaaccatcgttgcaaatgaagctgacttacgacaatccatgcaagccgttgacgac
gctcaaaacgcgctggcggcagccaacaagcaagtggaagcaactcaacaacgtgtcgaa
caggctgaaaaagaagttgaccaggctacgcagcaagtaaccaccgcccaaacgcaacta
acttcaacttaccaacagttgattgaaaccaacggactagcactaaagtcaccctacgat
ttgaccgcagtcagggcttttttcgctgagcaactcgccacaattacgaagaagcttgag
gcagcccaacgagtggttcaagctattgagaaatatactgctgaactggaagcacaacaa
aaacaggcccaacaaacggagttacagttaggcgaacaacgggccttattgcgcaataaa
acagccgatttgacggtagctcaggcagccattggtacggacttacaagtcacaagcgct
gacctgctggccgaaaaagcgcatctcaatcagatcgtcgcgacctaccaacaacgccta
gaggccgcccaagccaccgttcaaaccagtcaacttactttatcaaaacatcaaactaag
ctcgatgatttaaacgaccggttgaagacaacacaggccacgcgcacgcagcttgagcaa
acaatcgcacaggccttagctgctccagaagcaccgactcatgaccaaaccgtacttgaa
aattggttagaagaactcgccaatggtcgactgaccgccctgcaagtccaaattgccacc
tatcggcaagacaaggagcgtctgacaaccgaaatcaagcaactgcaaaccgccttaacg
aacgttgaacgaccgaatattacgggcatccaagctcagctggccgacctgcaagctcat
aaggatcgagcactgcaatcccaaaccgtggcggaacaagccttaaccgacgcgcaaagt
tgtctcgaaaaagtccaacaaatcatgcaccagcaaggcacatttgcaaagcggttcgcc
gaaattacaagcctgtataatatcatgactggtaaagatggcaacgatcacaagctcaag
ttagagacctacgttgtccaaaactacttgcaacgcgtcttaaactacgccaatgatcac
tttatcaacctgctttccaataaccgctacacatttgaactagctgccgaagcgagtgat
aaccgcagtgaccatggcctcgatatcaatgtttacgataatgagaccggcaactcgcgt
tcatccaacacgttgtctggtggtgaaaccttcattgctgctctgtcgattgcactctcg
ctcagtgaggtcgttcaatcttcggctaatggcgtccaaatcgacgcactatttgtcgac
gaaggcttcggctccctggatgatgaaactttggaaaaagcgatgcaggcactcgaaaca
attggtgaaaaccgaatggtcggtgttatcagtcacattgaatcaatgaaacgaacgatt
ggccaacaagttctcatcaaaaagatgggggatggccgcagtaccgtgcggttgatcagt
aaatag
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integrated database retrieval system
