Lactiplantibacillus plantarum WCFS1: lp_1879
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Entry
lp_1879 CDS
T00115
Symbol
hbsU
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
lpl
Lactiplantibacillus plantarum WCFS1
Brite
KEGG Orthology (KO) [BR:
lpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpl03032
]
lp_1879 (hbsU)
03036 Chromosome and associated proteins [BR:
lpl03036
]
lp_1879 (hbsU)
03400 DNA repair and recombination proteins [BR:
lpl03400
]
lp_1879 (hbsU)
DNA replication proteins [BR:
lpl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
lp_1879 (hbsU)
Chromosome and associated proteins [BR:
lpl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
lp_1879 (hbsU)
DNA repair and recombination proteins [BR:
lpl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
lp_1879 (hbsU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
Rpf1_C
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
CCC79146
UniProt:
F9UPK7
LinkDB
All DBs
Position
complement(1697623..1697898)
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AA seq
91 aa
AA seq
DB search
MANKAELVNNVAAATNLTKKDATAAVDAVFASIQDTLAKGEKVQLIGFGNFEVRERAARK
GRNPQTGDEIQIPASKVPAFKPGKALKDAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaaagctgaattagttaacaacgttgctgcggcaactaacttaacgaagaaa
gacgcaactgctgcagttgacgcagtctttgcatcaatccaagacactcttgcaaagggt
gaaaaagttcaactgatcggatttggtaactttgaagtacgtgaacgtgcagctcgtaag
ggccgtaacccacaaactggtgacgaaatccaaattcctgcaagcaaagtacctgcattt
aagccagggaaagctttaaaggacgcagttaaataa
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