Lactiplantibacillus plantarum WCFS1: lp_1903
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Entry
lp_1903 CDS
T00115
Symbol
clpB
Name
(GenBank) ATP-dependent Clp protease, ATP-binding subunit ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
lpl
Lactiplantibacillus plantarum WCFS1
Brite
KEGG Orthology (KO) [BR:
lpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lpl03110
]
lp_1903 (clpB)
Chaperones and folding catalysts [BR:
lpl03110
]
Heat shock proteins
HSP100
lp_1903 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
ATPase_2
NBD_SMAX1
TniB
AAA_14
nSTAND3
bpMoxR
RuvB_N
AAA_7
IstB_IS21
AAA_18
AAA_28
NACHT
Roc
RNA_helicase
AAA_3
Zeta_toxin
ABC_tran
AAA_24
Torsin
VapE-like_dom
ABC_tran_CTD
DNA_pol3_delta2
HH_RND_rel
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
CCC79166
UniProt:
Q88VX7
LinkDB
All DBs
Position
complement(1719286..1721889)
Genome browser
AA seq
867 aa
AA seq
DB search
MNPEQFTESLQQALQQAQQIAQTRRHQEIGVPHLFKFLTQPGELVRQIFSEAGADLDQLQ
TELDRELDDIAVVSGGNVQYGGSMSSSLATLMQAADAKRKALGDDYLATDTLALALMDQT
GDQLTKYLNQQGITAGQVKNAVDRIRGGQRVTSRNQEDQYQALEKYGVDLVKQARQGNQD
PVIGRDEEILDVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRGDVPENLKDKTLF
SLDMGSLIAGAKYRGEFEERLKAVLKEIKKSDGQIIMFIDEIHNIVGAGKTEGSMDAGNL
LKPMLARGELHLIGATTLDEYRQYMEKDKALERRFQKVLVAEPSVEDTISILRGLKERFE
IHHGVRIHDNALVAAAKLSDRYITDRYLPDKALDLVDEASAEIRVEMNSNPTELDQVNRQ
LMRLEVEEAALKKETDDASVKRLADVQKELASAKEKQRTLSERWDSEKKSLQALSDKKSA
LDKAKHDLENAENNYDLEQAAKLQHGTIPKLEQELKAMEANDHHEDWLVEESVTPDQIAN
VVSRMTGIPVAKLVAGEREKLLHLADHLHERVVGQDAAVDAVSDAVLRSRAGLQDPNRPL
GSFMFLGPTGVGKTELAKALAENLFDADDHMVRIDMSEYMEKESVSRLVGAAPGYVGYEE
GGQLTEAVRRNPYSIVLFDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTILIMTS
NLGSELLLAGVDDQGHLSADTHQQVMQLVQSRFKPEFLNRIDDIIMFTPLQLGAIEEIVV
KLIDRLSARLQDREITLKISDEAKKWIAKQGYEPAYGARPLRRFITNHVETPLAKEIIAG
RVAPKSTVAINLMDDHLVFENQSTQPA
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagaacaatttacagaaagtttacaacaagccttacaacaggcacaacaaatc
gcacaaacacggcgccatcaagaaattggggtgccccatctatttaagtttttaacgcaa
ccaggcgaactggttcggcagatctttagtgaggccggcgctgatttagaccaattacaa
acagagctcgaccgtgagctggatgacattgccgttgttagcggtggtaacgttcagtac
ggtggcagtatgagcagtagtctagctacgctgatgcaggctgccgatgctaagcgcaaa
gcgttaggtgatgattaccttgcgaccgacactttggctttagcgctgatggatcaaact
ggtgatcagttgaccaaatacttgaatcagcaaggcatcacggcaggacaagtcaagaat
gccgttgatcgtattcgcgggggccaacgggtcacgtcacgtaatcaggaagatcagtat
caagctttggaaaagtacggcgtcgacttggttaagcaggcgcgccaggggaatcaagat
ccagtaattggccgggacgaagagattctggatgttattcggatcttgtcacgaaagacg
aaaaataatcctgtcttgattggtgaaccgggagttgggaaaactgccatcgtggaaggc
ctagcgcaacgaattgttcgtggtgatgtgccggagaacttaaaagataagacgttgttc
tcgctagatatggggtccctgattgccggggcgaagtatcgtggtgaatttgaagaacga
ctcaaagccgtcctcaaggaaatcaagaagagcgatgggcagatcatcatgttcatcgat
gaaatccataatatcgttggtgctggtaagacagaaggcagtatggacgccggtaacttg
ttgaaaccaatgttggcgcggggagaacttcatttgatcggggccacgacgttagatgaa
tatcgtcagtacatggaaaaggacaaggcgctcgagcggcggttccaaaaagtattggtt
gctgaaccgagtgttgaagatacaattagtattttacgtggcttaaaggaacgctttgaa
atccatcatggtgttcggattcatgataacgccttagtggccgctgccaagttatctgat
cgttatattacggatcgttacttgccagataaggccttagatttagtagatgaggcttct
gctgaaattcgggtcgaaatgaactccaacccaacggaattagaccaagtcaaccgacaa
ttaatgcgtttagaggtcgaggaagccgccttaaagaaggaaactgacgatgcctccgtt
aaacggctagcggatgtacaaaaagaactcgccagcgcaaaggaaaaacagcggacttta
tccgaacgctgggacagtgaaaagaagagtctccaagcgttaagcgacaaaaagtcggcg
ttagacaaagctaagcacgacttggaaaatgctgaaaataattatgatctggaacaagca
gctaagttgcagcacgggacgattccaaagctggaacaagagttgaaggccatggaagcc
aatgatcatcatgaagattggttagttgaggaatccgtcacgccagatcagattgcaaac
gtggtttcccggatgacaggaatcccagtagccaaactggttgccggtgagcgggagaaa
ttattacacttggcggaccatttgcatgaacgagtggttggtcaggatgcggcggtcgat
gccgtttcggatgccgtattacgttcgcgggccggtttgcaagatcctaatcgtcccctg
ggttcttttatgtttttaggcccaactggggttggtaagacggaattagcgaaagcattg
gctgagaatttgtttgacgccgatgatcatatggttcggatcgatatgagtgaatatatg
gagaaagagtccgtttcgcgattggtcggggcggcaccgggctacgttggttacgaagaa
ggcggtcagttgaccgaagctgtccggcgtaatccgtactcgatcgtgttattcgatgaa
attgaaaaggcgcatccagatgtgtttaacatcttgttacaagtattggatgacggtcgg
ttgacggatggtcaaggacggaccgtcgacttcaaaaataccatcttgattatgacgtcg
aacttaggatcagagttgctactggcgggggttgatgaccagggtcacttgtcggccgac
acccatcaacaggttatgcagctggttcaaagtcgattcaaaccggaatttttgaaccga
atcgatgacatcattatgttcacgccactacaattgggcgcgattgaggaaattgtggtg
aaattgattgatcggttgtctgcccgtctccaagatcgtgagattacactgaaaatttct
gacgaagcgaagaagtggatcgctaagcaggggtatgaaccggcatacggtgcccggccg
ctccggcgctttatcacgaatcacgtcgaaacaccgctggcaaaagagatcattgcgggg
cgcgtggcaccaaaatcgacagtcgccattaatttgatggacgatcacttagtcttcgaa
aaccaatcgacccagccggcataa
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integrated database retrieval system
