Lactiplantibacillus plantarum WCFS1: lp_2045
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Entry
lp_2045 CDS
T00115
Symbol
polC
Name
(GenBank) DNA-directed DNA polymerase III, alpha chain PolC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
lpl
Lactiplantibacillus plantarum WCFS1
Pathway
lpl03030
DNA replication
lpl03430
Mismatch repair
lpl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
lp_2045 (polC)
03430 Mismatch repair
lp_2045 (polC)
03440 Homologous recombination
lp_2045 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpl03032
]
lp_2045 (polC)
03400 DNA repair and recombination proteins [BR:
lpl03400
]
lp_2045 (polC)
Enzymes [BR:
lpl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
lp_2045 (polC)
DNA replication proteins [BR:
lpl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
lp_2045 (polC)
DNA repair and recombination proteins [BR:
lpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
lp_2045 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_a_NII
PHP
DNA_pol3_finger
DNA_pol3_a_NI
tRNA_anti-codon
HHH_6
RNase_H_2
DNA_pol_A_exo1
DEDDh_C
T2SSK
HHH_3
YhfH
Zn-ribbon_8
PolyA_pol
HlyD_3
Motif
Other DBs
NCBI-ProteinID:
CCC79291
UniProt:
Q88VK2
LinkDB
All DBs
Position
complement(1846029..1850342)
Genome browser
AA seq
1437 aa
AA seq
DB search
MSLNQQEMFEKLLEQIEMPTGPEFTEAAIDKLTVHQASKVWEFHLHFQHVLPYTQFMTFQ
NKLQIAFKEIARVTFTIVTDDTEVNGRELAEYWEWIVQHSGIKSPLVQSLCNSNVPTYED
GRVILLAENEVIQNFLTNQALGPIESTYHRLGFPKFSVHTMIDESASQAKIKEFHEQKAK
SDQALAQKAEAAIKKANEKRQKQADAPAPIDGPVQLGKQINPQEPAKQMVQITEEERSVV
VEGYVFDMEVRTLRSQRQLLILKVTDYSSSMVVKKFSRNADDEAQFAALKPGMWVRVRGS
VQEDSFMRDLTINAYDINETSHASRQDTAPADEKRVELHLHSNMSQMDATNSVSDYVKQA
AKWGHPAIAITDHSGAQAFPEAFAAGEKNNIKILYGVEANMVDDGVPIAYNDAHVDLKES
TYVIFDTETTGLSAIYDRVIELSAVKMVKGNVVDQFEEFIDPGFHLSETTTNLTSITDDM
VRGSKSEEEVFKLFREFYGDAIVVGHNVTFDIGFMNTGYARHHMGPITNPIIDTLTLARW
LYPNLRGYRLNTLAKKFNVNLEHHHRAIYDAETTGHLNHLFLKDAEDRYQVQFHDQLNDH
MNENAAYRHARPFHATLYAQTQAGLKNLFRIISLSNVEYYYRVPRVPRSVLNKYRDGILV
GSACSSGEVFTAMMQKGKEEARQKAGYYDFLEVQPKPAYSALIESGLIADTDHLEEIISN
MVELGHEMNIPVAATGDVHYLNPEDKIYRKILIHSQPGNPLNRTERPDVHFRSTDEMLKD
FDFLGTETAHEVVVDTPRALADQFEIVRPVKDKLYTPRMKGAEAEIEKLTMDRAHAWYGN
PLPEIVQKRVDKELKSIIGNGFSVIYLIAQRLVFKSNKDGYLVGSRGSVGSSIVATLSGI
TEVNPMPPHYRCPNCQYSHFYTNNEYGSGYDLPPKDCPECGTDMVRDGQNIPFETFLGFY
GNKVPDIDLNFSGDYQPIAHNYTKVLFGEKNVYRAGTIGTVADKTGYGYVKAYERDTNQT
LRSAEVDRLAKGTTGVKRTTGQHPAGIIVVPDYMDIYDFTPVQYPADDQSAAWQTTHFDF
HSIHDNILKIDILGHDDPTMIRMLQDLSGVQPESIPPVDPHVMKIFSSPEVLGVTEDQIF
SKTGTLGIPEFGTRFVRGMLEETHPSTFNELLQISGLSHGTDVWLGNAEELIKDGTVTLA
EVIGCRDNIMTDLIHYGMESDMSFQIMEHVRKGRGIPDEWQQAMKDANVPDWYIESCLKI
KYMFPRAHAAAYILMALRVAYFKVYFPLIYYTAYFSVRADDFDLVAMAHGKDAVKASMKA
ITDKGMDASAKEKNLLTVLELANEMLERGFKFSMVDLDKSDASDWLIDGDTLIAPFRAVP
GLGLNVAKQIVAARADKPFLSKEDLSKRGKVSKSLIDFMTENGVLSDLPDENQLSLF
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
gtgagtttaaaccaacaagaaatgttcgagaagttactcgaacaaattgaaatgccaacg
ggtcctgaatttacagaagcagcgatcgataaattgaccgttcatcaagcttccaaggtt
tgggaatttcatttgcatttccaacatgttttaccttatacacaatttatgacttttcaa
aacaaactccaaatcgcctttaaagaaattgcacgcgtgacctttacgatcgtgactgat
gataccgaggtcaatggtcgtgaactagctgaatactgggaatggatcgttcagcacagt
gggatcaagtcgcccctggtccaatcattgtgtaacagcaacgtgccgacttatgaagat
ggtcgggtcattttgttggctgaaaatgaagttattcaaaattttctaactaaccaagca
ttagggccgattgagagtacctatcatcgcttgggcttcccgaagttctccgtccacacg
atgattgatgagagtgcttcacaggcgaagatcaaggaatttcatgaacaaaaagcgaag
tctgatcaagcgttggctcaaaaagcggaagcggctatcaaaaaggccaatgagaaacgg
caaaagcaggcggatgcaccagcaccaattgatggtcctgtccaattaggcaagcagatc
aacccgcaagagccggctaaacagatggtccaaattactgaagaagaacggtcggtcgtc
gtggaaggctatgtcttcgatatggaagtgcggacgttgcgttcccagcggcagttattg
attctaaaggtgaccgactatagttcgtcaatggtcgtcaagaagttctcacggaatgct
gatgacgaggcacaattcgcggcactgaagcctggaatgtgggtacgtgtacgtggttct
gtgcaggaagatagttttatgcgcgatttaacgatcaatgcgtatgatattaacgaaacg
tcgcatgccagtcggcaagacacggcgccggcagatgagaagcgggttgaattgcacttg
cattctaatatgagtcagatggatgcaaccaacagtgtcagtgattatgtcaaacaagcc
gctaaatggggccatccggcgattgcgattacggatcattcgggggcacaggcgttccca
gaagcgtttgcggctggtgaaaaaaataatatcaaaattttatacggtgtcgaagctaac
atggttgatgacggggtgccgattgcttataatgacgcccacgttgatttgaaagagtcc
acctacgttatttttgatactgaaacaacggggttgtccgccatttatgaccgggtcatc
gaattgtcagcggttaagatggtcaaggggaacgtcgttgatcagtttgaggaatttatt
gaccctggttttcacttgtcggaaacaaccactaatttgacgagtatcaccgatgatatg
gtgcggggctctaaatcggaagaagaagtgtttaaacttttccgcgaattttatggtgat
gcaatcgtggtcggtcataacgtcacctttgatattggctttatgaatacgggctatgcc
cggcatcacatggggccgattacaaatccaattattgatacgttgacgctggcgcggtgg
ctgtatccgaatttacgcgggtaccgcttaaacaccctagccaaaaaattcaacgttaat
ttggagcaccatcaccgcgccatctatgatgctgagacgactggtcatttgaaccacctg
tttttgaaagatgcggaggaccgttatcaggttcaattccacgatcagctgaatgatcat
atgaatgaaaatgcggcttaccgccatgcccggccatttcatgcgacattgtatgcgcaa
acccaagcggggttgaaaaatctcttccgaattatttccttgtcgaatgttgagtactat
taccgcgtgccccgtgtaccccgcagtgttttaaacaaatatcgggatggcatcctggtc
ggttcggcttgttctagtggtgaagtctttactgcaatgatgcaaaaggggaaggaagag
gcccgacaaaaggccggctactatgacttcctggaagtacaaccgaaaccggcatattcg
gcgctgatcgagagtggtttgattgctgatacggatcatttggaagaaattatcagcaac
atggtggaactaggccatgagatgaatatcccggttgctgctacgggggatgtgcattat
ctgaatcctgaggataagatttatcgtaagattttgattcattcacagcccggtaacccg
ttaaatcggactgaacggccagacgtgcattttcgctcaacggatgagatgcttaaagat
ttcgatttcttaggtacggagacggcacatgaggtcgtggttgacacgccccgcgcgctt
gctgaccaatttgaaatcgtgcgaccggtcaaggataagttgtatactccgcggatgaag
ggtgccgaagcggaaatcgaaaaactgacgatggaccgtgcccatgcgtggtacggtaat
ccgttgccagaaatcgtccaaaaacgggtggataaagagctgaagagtatcatcggtaac
gggttctcggtcatttacttaattgcccaacgcctagtgtttaagagtaataaagatggt
tacttggttgggtctcgggggtcagtcggttcgagtatcgtagcgacgctgtctgggatt
actgaagtgaacccgatgccaccgcattatcggtgtccaaattgtcagtactcgcacttt
tatacgaataacgagtatggatcgggctatgatttaccacctaaggattgccctgaatgt
gggactgacatggtgcgtgatgggcaaaacattcccttcgaaacgttcttaggattttat
gggaacaaggtgccagatattgatctgaacttctctggggactaccaacctattgcccat
aattacaccaaagtcttgttcggtgagaaaaatgtgtaccgagccgggacaattggaacg
gtcgctgataagactggttatggttatgtcaaggcgtatgaacgggatacgaatcaaaca
cttcgttcggcggaagttgaccgattagcaaagggaacgactggcgttaaacggacgact
gggcaacatccggccggtattattgttgtgccggattacatggatatttatgatttcacg
cccgtccagtatccggctgatgatcagagtgcggcctggcaaacgacccactttgatttc
cattcgattcatgataatattttgaaaattgatattctgggacatgatgatccgacgatg
attcggatgttacaagatttgtcgggtgtccaacctgagagtattccaccagttgatccg
cacgtcatgaagattttctccagtcctgaagttttaggagtcacagaagaccagattttc
tcgaaaacggggacgcttggaattccagaatttgggacgcggtttgtccgtgggatgctc
gaagagactcacccatccacgtttaacgaattacttcagatttcaggactttcacacggg
actgacgtgtggttaggaaatgctgaagaattgatcaaggatggcacggttacgctggcc
gaagttattggttgtcgtgataacatcatgaccgacttgattcactacggcatggaatct
gatatgtctttccaaattatggaacacgtgcggaagggtcgggggatcccggatgaatgg
caacaagcaatgaaggatgccaacgttcccgactggtacattgaatcttgtctaaagatc
aagtatatgttcccgcgggcccatgcggcagcctatatcttaatggcgttgcgggtggct
tactttaaagtgtacttcccgttgatttattacacggcttatttctcagtccgtgctgac
gattttgacctggttgcgatggcccatggtaaagatgctgtcaaagcgtcaatgaaggcg
atcactgacaaagggatggatgctagcgccaaggagaaaaacttactgaccgttttagag
ttagccaacgaaatgttggagcggggctttaaattctccatggtcgaccttgacaaatct
gatgcttcggattggctgatcgatggtgatacgttgattgcgccgttccgagcagttccg
gggttagggttgaacgttgccaagcaaatcgttgctgcccgagcggacaagccgttcctg
tcgaaggaagacctgtctaagcgtggaaaagtgtcgaagagtttgatcgactttatgact
gaaaatggtgtgttaagtgatttgccagatgaaaaccaactctcgttgttctag
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