Lactiplantibacillus plantarum WCFS1: lp_2128
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Entry
lp_2128 CDS
T00115
Symbol
holA
Name
(GenBank) DNA-directed DNA polymerase III, delta chain
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lpl
Lactiplantibacillus plantarum WCFS1
Pathway
lpl03030
DNA replication
lpl03430
Mismatch repair
lpl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
lp_2128 (holA)
03430 Mismatch repair
lp_2128 (holA)
03440 Homologous recombination
lp_2128 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpl03032
]
lp_2128 (holA)
03400 DNA repair and recombination proteins [BR:
lpl03400
]
lp_2128 (holA)
Enzymes [BR:
lpl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
lp_2128 (holA)
DNA replication proteins [BR:
lpl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
lp_2128 (holA)
DNA repair and recombination proteins [BR:
lpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
lp_2128 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
SDR-like
Motif
Other DBs
NCBI-ProteinID:
CCC79361
UniProt:
F9UQ72
LinkDB
All DBs
Position
complement(1920294..1921355)
Genome browser
AA seq
353 aa
AA seq
DB search
MIAINAQQALKSIRNGDLASIYVILGTVDYLADQLKQAFTQQIPSEEQTMNVGSYDMETT
PVAVALDDAMSAPFFGERRLVFINHPYFLTGENKKTKVDHDLASLQHYFEQPEPSTILVF
MAPYEKLDARKKLVKTLKKQATTVEVNQVSEAETQRYVQAALDEKQIRIDADALQELVNR
TDGQLGLIMGQLPKLMIYAAQSQRIDLAAVQALVTKSLTQNVFDLVNDVLRYQTQSAVEL
YHELVAAQEAPLKINAILLGQFRLLLQVKIMARAGYSQGSLASTLKVHPYRVKLAMQTVR
HFDQAALRAAYLGLLQTEVQMKTTQRDPELLFELFMVQFVNERQSAVGTRLSR
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgccatcaacgcacaacaggcgttaaaatcgattcgcaacggtgacttggcatcg
atctatgttatcttgggaacggtcgactatttggccgatcagctcaaacaggcttttacg
cagcaaattcccagtgaagaacaaacgatgaacgtcggcagttatgatatggaaacgacg
ccagtagctgtggctttagatgatgcaatgtcggcaccgttttttggtgaacggcgatta
gtctttattaatcacccgtactttttgacgggtgaaaataagaagaccaaggttgaccat
gatctggcctcactacagcactattttgaacaaccggaaccaagtacgattctggtgttt
atggcaccctatgagaaattagatgcgcgtaaaaagctcgttaaaacgttaaaaaaacag
gcgacgacggttgaagtcaaccaagtctcggaggctgaaacgcaacgctatgtgcaagcg
gcgttagatgagaaacagattcgcattgatgcggacgcactacaggaactggttaatcga
actgacgggcagttgggactgattatgggacaattaccgaagttgatgatttacgcagcc
caatcccaacgaattgatttagcggcagttcaggctttggtgactaaatcactgacgcaa
aatgtttttgatttggtcaacgatgtacttcgttatcagacgcagtcagcggtcgaactt
taccatgaactggtggcagctcaggaagccccactaaagatcaatgcaatcctattagga
caattccgattgttgctacaggtcaaaattatggcgcgtgcaggctatagtcagggcagc
ctagctagcacgcttaaagtgcacccatatcgggtcaaactagccatgcaaacggtccgc
cattttgatcaagctgcgttacgggcggcgtacttaggactgctccaaacagaagtacaa
atgaaaacgacacaacgcgacccggagttgctctttgagttatttatggttcaatttgtt
aatgagcgacagtcagcggtcggaacgcggctgtcccgttag
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