Legionella pneumophila subsp. pneumophila Thunder Bay: LP6_0010
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Entry
LP6_0010 CDS
T02689
Symbol
hfq
Name
(GenBank) bacteriophage Q beta replication host factor-I protein
KO
K03666
host factor-I protein
Organism
lpm
Legionella pneumophila subsp. pneumophila Thunder Bay
Pathway
lpm02024
Quorum sensing
lpm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LP6_0010 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LP6_0010 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpm03019
]
LP6_0010 (hfq)
03036 Chromosome and associated proteins [BR:
lpm03036
]
LP6_0010 (hfq)
Messenger RNA biogenesis [BR:
lpm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LP6_0010 (hfq)
Chromosome and associated proteins [BR:
lpm03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
LP6_0010 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AGN12936
LinkDB
All DBs
Position
13059..13316
Genome browser
AA seq
85 aa
AA seq
DB search
MSKNHLLQDPFLNELRKEKVPVSVFLVNGIKLHGIIDSFDQYVVMLKNSITQMVYKHAIS
TVVPSRMVKIPAEESSGEEEGTVAD
NT seq
258 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaatcatttactacaagaccctttcctaaatgaattgcgcaaggaaaaggta
cctgtttcagtgttcctggtcaatggtattaaattgcatgggataatcgattcttttgat
caatatgtggtgatgcttaaaaactccataacccaaatggtttataaacacgccatttca
acagttgttccttctcgaatggtcaaaattcctgctgaggaaagctctggtgaggaagaa
ggaactgtggcagactaa
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