Legionella pneumophila subsp. pneumophila Thunder Bay: LP6_0104
Help
Entry
LP6_0104 CDS
T02689
Symbol
polI
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lpm
Legionella pneumophila subsp. pneumophila Thunder Bay
Pathway
lpm03030
DNA replication
lpm03410
Base excision repair
lpm03420
Nucleotide excision repair
lpm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LP6_0104 (polI)
03410 Base excision repair
LP6_0104 (polI)
03420 Nucleotide excision repair
LP6_0104 (polI)
03440 Homologous recombination
LP6_0104 (polI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpm03032
]
LP6_0104 (polI)
03400 DNA repair and recombination proteins [BR:
lpm03400
]
LP6_0104 (polI)
Enzymes [BR:
lpm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LP6_0104 (polI)
DNA replication proteins [BR:
lpm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LP6_0104 (polI)
DNA repair and recombination proteins [BR:
lpm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LP6_0104 (polI)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LP6_0104 (polI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
DAO_C
Motif
Other DBs
NCBI-ProteinID:
AGN13029
LinkDB
All DBs
Position
complement(112238..114928)
Genome browser
AA seq
896 aa
AA seq
DB search
MKPPLILIDGSSYFFRAFHALPPLTNSKGQPTGAIYGVANMIKKIIKDYQPEEIAVVFDA
KGKTFRDEWYPEYKAHRPPMPQELSSQFQPLIQLLQAMGLPLLIIDGVEADDVIGTLAKQ
ATEQGIPVVISTGDKDMAQLVNEHVSLINTMSNYSMDIDGVKAKFGVTPEQIIDYLTLIG
DSVDNIPGVEKCGPKTAVKWLTEYQTLDNLLAHANEIGGKIGEYLRASIPHLPLSKKLVT
IKTDLDLPLNLNQLMPKPADSEQLIKLTRELEFKSWLKELLQEEENQKSPKEMDASNNKS
YEIITTHKQLNHWLNKLEQSQQFCIDTETTNLDVMQAELVGISLAVEEENASYIPLAHTD
GSTQLVKEEVLTALKPILENPAIGKIGQNIKYDYSVLKNYGITLKGIGYDTMLESYVLNS
GAGRHDMDSLALKYLGYKTISYEDVAGKGAKQLRFDQIPVVKAGIYAAEDADITLRLHHK
LYPMLDESLRNVLHDIEIPLLTVLADMEMHGVLIDPVILEKHGSRLKEQMKSLEQEAVQL
AGKAFNLNSPKQLQEILFDEQKLPVVAKTPTGQPSTAESVLQELAFDYRLPAVILEYRSL
SKLVSTYIDALPKRINPKTHRVHTSYNQAVAATGRLSSSDPNLQNIPIRSEEGRLIRTAF
IAPEGSLIMAADYSQIELRIMAHLSQDDNLLRAFANGWDIHAATASEIFQTNLDAVSKEQ
RRRAKAVNFGLIYGMSAFGLAKQIGVERQDAQHYIDTYFRRYPKVLEYMERTRKQAHQLG
YVETLFGRRLYLPEINSRNLMRQKAAERTAINGPMQGTAADIIKKTMLAISSWEHSQKNP
SAKMIMQVHDELVFEVRKEAVEECRAIIHKLMEQTVKLSVPLVVSIGTGSNWDDAH
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgcctctgattctaatagacggatcttcctatttctttagagcgtttcatgcc
cttccaccattgacaaactccaaaggccagcctacaggcgccatttatggagttgccaat
atgattaaaaaaataatcaaagattatcaaccagaagaaatagccgttgtctttgatgcc
aaagggaaaacattccgagatgaatggtatccagaatacaaggcacacagaccaccaatg
cctcaagaattaagctctcagtttcaaccgctaatccagttactgcaagcaatgggattg
cccttgcttatcatcgatggagtcgaagcagatgatgtgattggcactttggcaaaacaa
gccacagagcaaggcataccagttgttatatcaaccggtgataaagacatggcacaattg
gtcaatgaacatgtctccctcattaatacaatgagtaattacagtatggatattgatggt
gtcaaagcaaaatttggtgtaacacctgagcaaatcattgattacctcactctcattgga
gatagtgtagataatattccgggagtagagaaatgcggtcccaaaacagctgtaaaatgg
ctgacagagtatcaaacgcttgataatttgcttgcacacgccaacgaaattggcggcaaa
attggtgaatatttgcgtgccagcatccctcatttgccactctcaaaaaaattggtcact
atcaaaactgatttggatttgcccttaaatttaaaccaattgatgcccaaaccggctgat
agcgagcaattaattaaattaactcgtgaattagaatttaagtcatggcttaaagagtta
ctacaggaagaagagaatcaaaaatcacccaaagaaatggatgccagcaataataaatcc
tatgaaataataacgactcataaacagttaaatcattggcttaataagctagagcaaagt
caacaattttgcatcgacacggaaacaaccaaccttgatgtcatgcaagctgaattggta
ggcatctctttagcagttgaggaagaaaatgcatcttatattccccttgctcatactgat
ggcagtacacagttagtaaaagaagaagttttaactgctttaaagcctattttggaaaat
ccagctataggaaaaatagggcaaaacattaaatatgattacagtgtccttaaaaattat
ggcattaccttaaaaggcattgggtacgacaccatgctggaatcctatgtgctcaatagt
ggtgcaggcagacatgatatggattctctagctttaaaatatctgggttataaaacaata
agttatgaggatgttgcgggaaagggagccaaacagctccgttttgaccaaattccagta
gtgaaggccgggatctatgcagccgaagacgctgacattactttgcgattacaccataag
ctgtaccccatgctggatgagtcattgcgtaacgtgttgcatgatatcgagataccttta
ctcactgttctcgcagacatggaaatgcacggcgttctcatcgacccagtcattctggaa
aagcacggaagtcgtttgaaagaacaaatgaaatctctggaacaggaagcagttcaactc
gctggaaaagcattcaatctcaattccccaaaacaattacaagaaatactatttgatgaa
caaaaactgcctgttgtagcgaaaacccccacgggacagccttcgaccgcagaatctgtt
ttacaggaattggcttttgattatcgccttcctgctgtaattctggaataccgaagctta
tcaaaattggtcagtacctatattgatgccttacccaaaagaatcaaccccaaaacacat
agagtgcacacatcctataatcaagcggtagcagcaacaggccgattatcttccagtgat
cctaacttacaaaatatccctatacggagtgaagaaggaaggttgattcgaactgccttc
atagcaccagaaggaagtcttatcatggcggctgattactcgcaaatcgagttaaggata
atggcgcatttatctcaagatgataaccttttacgagcttttgctaatggctgggacatc
catgccgcaacggcgagtgaaatctttcaaacgaatttggatgctgtgtccaaagaacaa
cgaaggcgtgccaaggcagtgaactttggtttgatatatggtatgtctgcctttggactg
gcaaaacaaattggtgtggagcgtcaggatgctcaacattatattgatacttacttccgc
cgttatcctaaggtacttgaatacatggagcgtactcgcaaacaagcgcatcaacttggt
tatgttgaaaccttgtttggccgtcgtctctacttgcctgaaattaattcacgcaaccta
atgagacaaaaagcagctgagcgcactgccatcaacgggccaatgcaaggaaccgcagct
gacattataaaaaaaaccatgctggctatttccagttgggagcattcgcaaaagaacccc
tctgcaaagatgatcatgcaggtacatgatgaattggtttttgaagtccgaaaggaagcg
gttgaagaatgtcgcgccattatccacaagctcatggaacaaactgtaaaattatctgta
cctcttgttgtgtctattggcacaggttctaactgggatgatgcgcattga
DBGET
integrated database retrieval system
