KEGG   Legionella pneumophila subsp. pneumophila Thunder Bay: LP6_0548
Entry
LP6_0548          CDS       T02689                                 
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
lpm  Legionella pneumophila subsp. pneumophila Thunder Bay
Pathway
lpm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lpm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LP6_0548 (mutM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lpm03400]
    LP6_0548 (mutM)
Enzymes [BR:lpm01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     LP6_0548 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     LP6_0548 (mutM)
DNA repair and recombination proteins [BR:lpm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     LP6_0548 (mutM)
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS NFACT_N MpsC zf-C3HC4_3
Other DBs
NCBI-ProteinID: AGN13467
LinkDB
Position
complement(592090..592914)
AA seq 274 aa
MPELPEVETTKQGIKPHLEGRMITAVQVRNRKLRLPVPLNLNELCQGKHITAITRRGKYI
LLHMDKGYLLIHLGMSGHLRIVSQTANPQKHDHVDLHINNGLALRFCDPRRFGLFIYIDE
NPYQHPLLAHLGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQIVVGIGNIYAAESLFL
AKIHPNTSAKKITTEEFNSLTGHIKKILESAIEAGGTTLRDFYSSDGKPGYFRFALKVYG
RKNLPCLVCENKIETVVIAGRHSAFCPHCQPIIT
NT seq 825 nt   +upstreamnt  +downstreamnt
atgcctgaattacccgaagtcgaaacaacaaagcaaggtattaaaccccatcttgaaggc
cgtatgattaccgcagtgcaagtgcgtaatcgaaaacttagattaccagtacctctaaac
ctgaatgaattatgccaaggaaagcatataacagctattacccgtagaggaaaatacatc
ttacttcatatggataaaggttatcttctcatccatcttggaatgtccggacatttgcgt
atcgtatcccagacagcaaatcctcaaaaacatgatcatgttgatctgcacattaataat
gggcttgctctcagattctgcgatcctagaagatttggcttatttatttacattgatgaa
aatccttaccaacacccactgctggcacatttaggcccggaacctctgtctgatgacttt
aatagcgagtacttattacgtaaagctgcgaataaatcgcaatccatcaagtcatttatt
atggatagtcaaattgttgtcgggatagggaatatttatgcggcagagagtctttttctt
gccaaaatccatccaaatacctctgcaaaaaagataactacagaagaattcaattctctg
actggtcacatcaaaaagatacttgaatctgccatagaggctggagggacgacacttcgt
gatttctattcttctgatggtaaaccagggtactttcgttttgctttaaaggtttatggc
aggaaaaatctcccctgtttggtatgtgaaaataaaatagaaactgtcgtgattgccggg
cgccactccgcattttgcccacattgccagccaatcattacataa

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