Legionella pneumophila subsp. pneumophila Thunder Bay: LP6_0857
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Entry
LP6_0857 CDS
T02689
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lpm
Legionella pneumophila subsp. pneumophila Thunder Bay
Pathway
lpm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LP6_0857 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpm03019
]
LP6_0857 (recQ)
03400 DNA repair and recombination proteins [BR:
lpm03400
]
LP6_0857 (recQ)
Enzymes [BR:
lpm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LP6_0857 (recQ)
Messenger RNA biogenesis [BR:
lpm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LP6_0857 (recQ)
DNA repair and recombination proteins [BR:
lpm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LP6_0857 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HEM4
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AGN13773
LinkDB
All DBs
Position
complement(946718..948544)
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AA seq
608 aa
AA seq
DB search
MGTLAQPSFINPNALAVLKKYFGFDSFRPPQEKIIEDVISGEDVLVLMPTGGGKSLCYQI
PAIVRPGVGIVVSPLIALMEDQVTALKLQGIRAAYYNSSLTAEDARNVLNQLHHNELDLL
YIAPERLISTSFLDRLSECTISLFAIDEAHCISQWGHDFRPEYACLGLLKTNFPDIPMIA
LTATADKQTREDIVTKLNYQPKKYVVSFNRPNIHYKVVPKTNAVKQLNLFLQSDTQQSGI
IYCGTRHTVEHLTAKLQELGFKARAYHAGLPHAERREVQNLFRYDRIDIVVATIAFGMGI
DKPNVRFVVHHDLPKSIEGYYQETGRAGRDGLPAKALLLYDAADSARLRSWIMNIPLEEQ
RHIETNKLNHMLAFAEASHCRRQILLRYFDEPSHTECKNCDVCDNPPQTADATEDAQKFL
SCIYRLKQSYGLTHTIDVLRGSLSEKIKQSGHEHLSTFGIGKEKSANYWKHLAWQLIHKD
YCLQDMNHFNVLRLTPKAIPLLKGVESISLTIPNNDLNSSKKKGKQNPSFKPESNPLFEK
LRALRRQLADEENKPPFMIFSDATLHEMAQLKPKNSKQLLNVSGVGQHKLARYGHYFLEA
LNEFSEVE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgggaactttagcgcaaccatcttttataaatccaaacgcattggctgttttaaaaaaa
tattttggatttgattccttcagacctcctcaggaaaaaataattgaggatgtcatttct
ggggaagatgtactggttttgatgcctactggagggggaaaatcgctttgctatcaaatt
ccagccattgtccgccctggtgttggcattgtagtatctcctttaatcgcgttaatggaa
gatcaagtaaccgctctcaaactgcagggtattcgtgcggcttactacaactcatcctta
accgccgaagacgctagaaatgtattaaatcaattacatcataatgaattggatttactc
tatattgctccagaacgtcttattagtacctcgtttctggatcgactgtcagaatgtact
atctctttatttgctatcgatgaagcacactgtatttcacaatggggacatgattttcga
cctgaatacgcctgtttaggtttactgaaaactaactttcctgacattcccatgattgct
ctgacagctactgccgataagcaaacacgtgaggatattgttaccaagttgaattatcaa
cccaaaaaatacgttgtttcattcaatcgaccgaatatccattacaaagtagttcctaaa
acaaatgcagtgaagcaattaaatctgtttttacaatctgatacccagcaatctggaatt
atttattgtggaacccggcatacagtcgaacatcttacagcgaaattacaagaacttgga
tttaaagcacgcgcttatcatgcaggcctgcctcatgcggagcggcgtgaggtgcaaaac
cttttcagatacgatcgcattgatattgtggtagctactattgcttttggaatgggtatt
gacaagcctaatgttcgctttgttgttcaccatgatttacccaaaagcatcgaaggttac
tatcaagaaacaggtcgtgcaggacgtgacggattaccggccaaggcccttcttctttat
gatgctgcggatagtgcccgtttgcggtcctggatcatgaacattcctcttgaggagcaa
agacatatagaaaccaataaattaaatcatatgcttgcttttgctgaagcgtcgcattgt
cgtcgtcaaattttattacgctattttgatgaaccttctcatacagaatgtaaaaactgt
gatgtttgcgataacccaccgcaaacagccgatgcaacagaagatgcgcaaaaattttta
tcgtgtatttatcgattaaaacaaagctatggtttaactcatactattgatgtcctgaga
ggtagtttatctgaaaaaatcaagcagtctgggcatgagcatttaagtacctttggaatt
gggaaggagaaatctgccaattattggaagcatcttgcctggcaattaattcataaggat
tattgtttacaggacatgaatcattttaatgtgttacgcttgaccccaaaagcgattccc
ctcctaaaaggtgtagagagtatttcattaaccatccctaacaatgacctgaatagcagt
aaaaagaaaggcaagcagaatccttcctttaaacctgaaagtaacccattatttgaaaag
cttcgtgcgttaagacgtcagttagccgatgaagaaaacaaaccaccatttatgatattc
agtgatgctacattacatgaaatggcccaattaaaacccaaaaacagtaagcaactactg
aatgtatcaggggttgggcaacataaattagctcgttatggccattattttctcgaagcc
ttaaacgaattttcagaagtcgagtga
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