| Entry |
|
|---|
| Symbol |
rne
|
|---|
| Name |
|
|---|
| KO |
|
|---|
| Organism |
lpm Legionella pneumophila subsp. pneumophila Thunder Bay
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:lpm00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LP6_2324 (rne)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:lpm03019]
LP6_2324 (rne)
03009 Ribosome biogenesis [BR:lpm03009]
LP6_2324 (rne)
Enzymes [BR:lpm01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
LP6_2324 (rne)
Messenger RNA biogenesis [BR:lpm03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LP6_2324 (rne)
Ribosome biogenesis [BR:lpm03009]
Prokaryotic type
rRNA processing factors
LP6_2324 (rne)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
2650870..2652861
|
|---|
| AA seq |
663 aa
MEKMLINAMQTEEIRVALIKNNQLFDLDIECPGEIKKKGNIYKAIVTRREPSLDAVFVEY
GSKRQGFLPLKEIAPEYLSKNPEEFGDEKPPITSLIREGQELLIQVDKEERGNKGAALTT
FITLAGCYLVLMPNNPHSGGISRRIEGDERDELRETLNALTLPEDMGLIIRTAGVGKSLE
ELQDDLNMLCNQWQSIKEAYNSELAPCLIHQEGDVIIRSIRDNLRKSISEIIIDDQISYI
KAKQYIERVKPEFLPNLKLYNSSIPLFNFYQIESQIETAYQRQVMLPSGGALVIDRTEAL
VSIDINSAKATGGADIEATALNTNLEAADEIARQLRLRDLGGLVVIDFIDMSSSKNQREV
ENRLKEALQADRARIQVGRISRFGLLEMSRQRLRLSLGETAQEICPRCEGRGTVRSIQSH
GLSITRLIEEEALKEKTAEIQVQLPPEMATFIMNEKRNFIRDIEKRHGVSVVVIANPYMH
PPQYTITRLKEDNVGKSKKPSYSLIQQPEVHVPSSDKEPVSHDEPAVKSFAEHRVIKHPQ
TSFIKRLWTSLFGGHSVAHTVTQEPGKKHHRAQNQGKHASSKSSGGDKRQQGSNANRRRR
SGGGQQRSSSGNTNAAASTHQQRKKSNANQQSHGSQQSNRSIPAKNEGNKKREAILAKEP
EEK |
|---|
| NT seq |
1992 nt +upstreamnt +downstreamnt
atggaaaaaatgctaatcaatgcaatgcaaacagaagaaattcgtgttgcactaattaaa
aacaatcaattatttgatctggacattgaatgcccgggagaaataaagaaaaaaggtaat
atttataaagccattgtaacaagaagagaacccagccttgatgctgttttcgttgaatat
ggttccaaacgccaaggtttcttacccctaaaagaaatagcgcctgaatacttaagcaag
aatccggaagagtttggagatgagaaacctccaattaccagcctcatccgtgaaggtcaa
gaattacttatccaagtggataaagaagaaagagggaataaaggagcagcactgacaact
tttattaccctggcaggttgctacctggttttaatgcccaataaccctcattcgggcgga
atatcaagacgtattgaaggtgatgagcgtgatgaattacgcgaaacattaaatgcttta
acactccctgaagacatgggccttattattcgcactgcaggtgttggaaaaagtctggaa
gaactgcaagatgacttaaacatgctttgcaatcagtggcaatccatcaaggaagcttat
aattcagaactggcaccttgcctgattcatcaagagggcgatgtcattattcgttccatt
cgtgacaatttgcgaaaatccatcagtgaaattattattgatgatcaaatatcctatatc
aaagcaaaacaatacattgaacgcgtaaaaccagaatttttacctaatctaaaactctat
aacagcagcatccctctttttaatttctatcagattgaaagccaaattgagacagcttat
cagcgccaggtcatgcttccttctggaggtgccttggtcatagatagaactgaagctctg
gtatcaattgatattaactcagccaaggctacaggcggtgccgacattgaagcgactgca
ttaaataccaaccttgaagcagctgatgaaattgctcgccagcttcgcctgcgtgattta
ggtggtttggtagttattgattttattgacatgagttctagtaaaaatcaaagagaggta
gaaaatcgactcaaagaagcactgcaggctgatagggccagaattcaagtagggcgaatt
tcacgctttggccttcttgaaatgtcaaggcaacgcctccgattatcattaggagaaact
gcccaggaaatttgtccacgttgtgaaggtagaggaactgtacgcagtatacagtctcat
ggcttatcaattacccgccttatcgaagaagaggcgctcaaggaaaaaacagctgaaatt
caagtgcaattgccaccagaaatggctacattcattatgaatgaaaaacgtaattttatc
agggacattgaaaaaaggcatggtgtcagtgttgttgttattgcgaatccttatatgcac
cctccacaatatacgattactcgcctgaaagaagacaacgtaggcaaatctaaaaaacca
agttactctttgattcagcaacctgaagtacatgttcccagcagtgataaagaacccgtg
tcacatgatgaacctgctgtgaaatcatttgccgaacacagggtcatcaaacaccctcaa
accagttttattaaacgattatggactagtttatttggtggtcattcagttgcccacacc
gtaactcaagaacccggtaaaaaacatcatcgtgctcaaaatcaaggtaaacacgcatcg
tccaaaagctcaggaggagacaagcgtcaacaaggcagcaacgcaaatcgtagacgtcgt
tcaggaggaggccagcagcgttcttcatcaggaaatacaaatgctgcggccagcacacat
caacaacgaaaaaaatctaacgcaaatcagcaaagtcatggcagccaacaaagcaatcgt
tcaattcctgcaaaaaatgaaggcaacaaaaaaagggaagccatactggctaaagagcca
gaggagaaatag |
|---|
