Legionella pneumophila subsp. pneumophila Thunder Bay: LP6_2373
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Entry
LP6_2373 CDS
T02689
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lpm
Legionella pneumophila subsp. pneumophila Thunder Bay
Pathway
lpm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LP6_2373 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpm03019
]
LP6_2373 (deaD)
03009 Ribosome biogenesis [BR:
lpm03009
]
LP6_2373 (deaD)
Enzymes [BR:
lpm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LP6_2373 (deaD)
Messenger RNA biogenesis [BR:
lpm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LP6_2373 (deaD)
Ribosome biogenesis [BR:
lpm03009
]
Prokaryotic type
rRNA helicases
LP6_2373 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Helicase_C_2
Cas3-like_C_2
AAA_19
adh_short
Motif
Other DBs
NCBI-ProteinID:
AGN15264
LinkDB
All DBs
Position
complement(2705074..2706843)
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AA seq
589 aa
AA seq
DB search
MNQEISNFSTFNFSNALNKALEDMKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAF
ALPILQNLSPEISTTQALILAPTRELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLK
QLRSGAQVVVGTPGRILDHIDKGTLLLNNLKTFILDEADEMLRMGFIEDVETILEKLPEK
KQMALFSATMPYRIRQIANTYLNDPASIEIRMETATVKSIEQRFLFASVHQKPDALIRVL
EVEDYQGVIVFVRTKSSTEEVAELLQQHGLRAMAIHGDITQSLRERIIAQFKQGAIDILV
ATDVAARGLDVERVTHVINYDMPHDNETYVHRIGRTGRAGRSGVTILFVTPKESRLISSI
ERHTRQRIEKVQVPNDHMIQMARQQRFMSNITTRLNHEHVYSYKRIVEEYIKEHDVSAVD
VAAALALLLHKDMPWRKELNMPKAASAFKEERARAGEKGLDLRGRFKEDRKSSFADRKGA
RGSKKDFAKDFSNERKKFNDGRKAVNQESVAQDLFRIDVGKIHGVKPGNIVGAIANEAGL
QSRYITGLKIHEDHSTVRLPKGMPKEVMKDLTKAWVCGRQLNLTLIGSA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagaaatatcaaacttctctacttttaatttttctaatgctttaaataaggcg
ttagaagatatgaagtttattacgccatcgcctatccaggctcaaaccattcctttgata
ttgcaaggtcgtgatgccattgctcttgcgcaaactggtacaggtaaaacagcggctttt
gcattaccaattttgcaaaatttgtcccctgagatatctaccactcaggctttgatttta
gcccctactcgtgaattggcaatccaggttgcagagcaatttgaattattaagcaagtac
caacgcaatgtgacgatcgccgttctttgcggtgggcaagaatatggtcgtcaattaaaa
caattgcgtagtggtgcgcaagtggttgttggaacgccaggacgtattctggaccatatc
gataaaggcaccttgctcttaaataatctgaagacatttattctggatgaagcagatgaa
atgttgcgtatgggtttcatcgaagatgtagaaaccattttagaaaaactgcctgaaaaa
aagcaaatggcattgttttcagcaaccatgccctatcgaattcgtcaaatagccaatact
tatttgaatgaccctgcctcaattgaaatccgtatggaaactgcgacggtcaagtctatt
gagcaacggtttttatttgcttccgtacatcaaaaaccggatgcgttaatccgggtcttg
gaagtggaggattatcaaggggttatcgtttttgtacgcactaaaagcagtactgaggaa
gtagcagaactattgcaacaacatggattaagagcaatggcaattcatggtgatattact
cagtctttgcgtgagcggattattgctcaatttaaacaaggagcgattgatattctggtg
gcgacggatgtcgctgcaagaggtttggatgtcgagcgagttactcatgtgattaattat
gatatgccacatgataatgaaacttatgttcacagaattggcagaacagggagagctggc
cgttctggtgttacgattttatttgtaactcccaaggaatcgcgtttaatttccagcatt
gaacgccataccaggcaacgaattgagaaagttcaagttcctaatgaccatatgatacag
atggctcgtcaacaaagattcatgtctaacattactactcgactgaatcatgagcatgtg
tattcctacaaaaggattgtggaagaatacattaaagagcatgacgtatcagcagtagat
gttgcggctgctcttgctttattgctgcataaagacatgccttggagaaaagaattaaat
atgcctaaagcagcttcagcattcaaagaagagagagctcgggcaggagaaaaaggattg
gatttacgtggtcgatttaaggaagatagaaaaagttcttttgctgatcggaaaggtgcg
cgaggaagcaagaaagattttgccaaagacttttctaatgaaagaaaaaaatttaatgat
ggcaggaaggccgttaatcaagaatcagtagcccaggatttatttcgtatcgatgtaggc
aaaattcatggagtcaaacctggcaacatagtaggggctattgctaatgaggctggcttg
caaagccgatatattactggtcttaaaattcatgaagatcactctactgttcgtttacca
aaaggtatgccaaaagaagtgatgaaggacttaaccaaggcttgggtttgtggccgccaa
ctcaatttaacattaattggtagtgcctga
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