Legionella pneumophila subsp. pneumophila Thunder Bay: LP6_2797
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Entry
LP6_2797 CDS
T02689
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lpm
Legionella pneumophila subsp. pneumophila Thunder Bay
Pathway
lpm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LP6_2797 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpm03019
]
LP6_2797 (pnp)
03016 Transfer RNA biogenesis [BR:
lpm03016
]
LP6_2797 (pnp)
Enzymes [BR:
lpm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LP6_2797 (pnp)
Messenger RNA biogenesis [BR:
lpm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LP6_2797 (pnp)
Transfer RNA biogenesis [BR:
lpm03016
]
Prokaryotic type
tRNA degradation factors
LP6_2797 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
S1_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AGN15681
LinkDB
All DBs
Position
complement(3172783..3174972)
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AA seq
729 aa
AA seq
DB search
MAKITKEIVFGNHKLILETGEVARQADGAVMASMNGTQVLVTVVWKKDGGESNDFFPLTV
NYQEKFYAIGKIPGGFNKREGRPSDNETLISRLIDRPIRPLFPDNFFNEVQIIATVLSLN
PEVSPDIIAMIGASAALSISGVPFNGPIGAARVGYKDGVYLLNPSRKEQEESKLDLVIAG
TKDAILMVESEAQELSEDIMRGAMLYGHEMMKNVIKSIEELARDVGKSKPEWKAPEIDTV
LKARINDVARNEVEAAYLIKDKQQRYQRLDELREQTISALLAENDELNADVIANMFGELE
RSIVRNRILDGEPRIDGRDHRTVRPISIRTKFLERTHGSCLFTRGETQAIVVATLGNERD
AQILDGISGESRDRFMLHYNFPPYSVGETGQVGSPKRREIGHGRLAKRALMAVLPDANEF
PYVLRIVSEITESNGSSSMATVCGTSLALMDAGVPLKAPVAGVAMGLIKEGDRYAVLTDI
LGDEDHLGDMDFKVAGTEKGITALQMDIKISGITNEIMEQALEQALEGRTHILGVMNNAL
AEHRTELSQHAPRITTMKVAEDKIRTIIGKGGATIKGLIESTGVSIDIDDSGVVQLFSPD
KMALEEAQKQIKALIAEIEVGQTYQGKVSKIVDFGAFINLLPGKDGLLHISQICADRTQK
VEEVLQEGQEIEVFVAGIDKQGRVKLEWKDKPQAEAKEVEDAPVSATFLTMEEQSEEINS
GNKISEEEE
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaattacaaaagaaatagtattcggtaaccataaattaatcttggaaacaggt
gaagtagcacgacaggctgatggtgccgtaatggcaagtatgaatggtacacaagtgcta
gtgactgtagtttggaaaaaggatggtggtgaaagtaatgattttttcccattaacagtg
aattatcaagaaaagttctatgccataggtaaaatccctggtggctttaacaaacgtgaa
ggacggccatctgataatgaaacattaatttctcggttaatagatagaccgatccggcca
ttattcccggataatttttttaacgaagtacagataattgctactgtactgtccttaaat
cccgaggtatctcctgatattatcgctatgattggagcctccgcagcgctttcaatttct
ggcgtgccatttaatggccctataggtgccgctcgagtaggctataaagatggcgtttat
ctgctcaatccaagtagaaaagaacaagaagagtctaagcttgatttggttattgcggga
acaaaagatgccattttgatggtggaatcagaagcgcaggaattaagtgaagacatcatg
cgtggtgctatgttatatggccatgaaatgatgaaaaatgtcataaaatcaatagaagaa
cttgctagagacgtgggtaagagtaaacctgagtggaaagcaccagaaattgatacagta
ctaaaagctagaatcaatgacgtagctaggaatgaagttgaagccgcttatcttattaag
gacaagcaacaacggtatcagcgattagacgagttaagagagcaaactatttctgcttta
ctggctgaaaatgatgagttaaatgcagatgttattgccaatatgtttggtgagctagaa
cgttctatagtacgtaatcgtattcttgacggcgagcctcgcatcgatggtcgtgatcac
agaacagttaggcctatttctattcgtaccaaattcttggaaagaactcatggttcctgt
ttgtttaccagaggagaaactcaagctattgttgttgccactttgggtaatgaacgtgat
gcacagatattagacggaattagtggcgaaagcagagatcgatttatgcttcattataat
ttccctccttattctgtcggcgaaacagggcaagtgggcagtcctaaacggcgtgaaatt
gggcatggccgtttagccaagcgtgctttaatggctgtactgcctgatgctaatgagttt
ccttatgtgctacgtattgtatctgagattacggaatccaatggctccagttctatggct
actgtttgtggaacaagtctggcattgatggatgccggggtacctttaaaagcaccagtc
gctggtgtggccatgggcttaatcaaggaaggtgatcgttatgctgtattaacagacata
ttgggtgatgaggatcatttaggtgatatggactttaaagtggccggtacggaaaaaggg
attactgctttgcagatggatatcaaaatttccgggattaccaatgaaattatggaacag
gctttggagcaagcattggaaggtcgtacccatattcttggtgtcatgaataatgctctt
gccgagcatagaaccgagttatctcagcacgctccaagaatcacaaccatgaaagtcgct
gaagataaaatccgcacaattattggcaaaggtggggcaacgattaaagggcttattgaa
agtaccggcgtatctatagatattgatgactcaggggttgtccaattattttctccggat
aagatggctttggaagaggcgcaaaaacaaattaaagctttaattgctgaaattgaagtg
ggtcagacttatcaagggaaagtaagcaagatagttgactttggagcttttatcaattta
ctgcctggtaaagatggcttactgcatatttcacaaatatgtgccgacagaacacaaaag
gtagaagaggtattgcaggaaggtcaggaaattgaggtctttgttgctgggatagataag
caagggcgagtcaaactggagtggaaggataagccgcaagctgaagccaaagaggtcgaa
gacgccccggtatctgctacgtttcttacaatggaagagcaatctgaagaaattaattca
ggcaacaaaatctctgaagaagaggaataa
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