Legionella pneumophila subsp. pneumophila Philadelphia 1 (serogroup 1): lpg0250
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Entry
lpg0250 CDS
T00199
Name
(GenBank) ATP-dependent RNA helicase, DEAD box family
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
lpn
Legionella pneumophila subsp. pneumophila Philadelphia 1 (serogroup 1)
Pathway
lpn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
lpg0250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpn03019
]
lpg0250
Enzymes [BR:
lpn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
lpg0250
Messenger RNA biogenesis [BR:
lpn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
lpg0250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
ERCC3_RAD25_C
UTP25_NTPase-like
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AAU26357
Pasteur:
lpg0250
UniProt:
Q5ZYW1
LinkDB
All DBs
Position
complement(296785..298029)
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AA seq
414 aa
AA seq
DB search
MSFKQLALIEPLNRAVSELGYTTPTSIQLKAIPLILNGHDLLGSAQTGTGKTASFVLPIL
QKASQQTQTSPNRVKVLILTPTRELAIQVHESIIQYGKYLTLRSAVIYGGVKSHNQIKQL
DSGLEILVATPGRLLDLYQQRAVKFDEIDTLVLDEADRMLDMGFIHDIKKIIKLLPLKRQ
NLLFSATFTPEVRALARNILNKAVEIDIAPRNTAVKTIKQTVYSVDRNHKLALLSHLLHK
NNWGQTLVFSRTKHGANKLVKQLAESQIYSVAIHGNKSQAQRIKALADFKSGKVQTLIAT
DIAARGIDIEKLACVVNFDLPHVPEDYVHRIGRTGRAGASGLAVSLVSTEEIKLLLSIEK
LINQKLERIKIKDFEFLHNFSDFVSAKIQKFAPPKAGYKGNISRKSRTAFNKSA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaaacaattagcgctgattgagccgctaaacagggcggttagtgagttaggc
tacactacccctaccagtattcaattaaaagccatcccgctcattttaaatgggcatgat
ttacttggttccgctcaaacaggaacaggaaaaacagcaagctttgtattgcctatcttg
caaaaagccagtcagcaaactcaaaccagccctaatcgagttaaagtactgattttaacg
cctacacgtgaattagccatccaggtccacgagagcataatccaatatggcaaataccta
acactgcgctcagctgtgatttacggaggagtaaaaagccacaaccaaattaaacaatta
gactcaggccttgagatactggttgcaacaccgggaagattattggatttatatcagcaa
cgtgctgttaaatttgatgagattgacaccctggtactcgatgaggcggatagaatgctg
gatatggggtttattcatgatataaaaaaaattatcaaattattacctttaaaaaggcag
aacctgcttttttcagcaacctttacccctgaagtacgcgctttagccagaaatatactg
aataaagcggttgaaattgatatcgcaccgagaaataccgcggtaaaaaccataaaacaa
actgtttattcagtagatagaaaccataagttagcccttctgagtcatttacttcataag
aataactggggacaaactttggttttttctcgaaccaaacatggagccaataaactggtt
aagcaactggccgaatcccaaatatattcggttgctattcatggcaacaaatcacaggct
caacgaataaaagccttagctgatttcaagtcaggcaaagtacaaacattaattgcaaca
gacatcgcagcacgtggcatagacatcgagaaacttgcctgtgtagtgaattttgacctg
cctcatgtgcctgaggactacgttcatcggattggacgaacaggacgggcaggcgcctct
ggattggctgtatccttggtcagcacagaagaaataaagctgctgctgtctatagaaaaa
ttaatcaatcaaaaactggagcgcattaaaattaaagattttgagtttttgcataacttt
tcagattttgtctcagccaaaattcaaaaatttgcgccgccaaaagcaggatataagggc
aatatcagcagaaaatccaggacggcttttaataaaagcgcgtaa
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