Legionella pneumophila subsp. pneumophila Philadelphia 1 (serogroup 1): lpg1187
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Entry
lpg1187 CDS
T00199
Symbol
rdgC
Name
(GenBank) exonuclease involved in removal of stalled replication fork
KO
K03554
recombination associated protein RdgC
Organism
lpn
Legionella pneumophila subsp. pneumophila Philadelphia 1 (serogroup 1)
Brite
KEGG Orthology (KO) [BR:
lpn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpn03400
]
lpg1187 (rdgC)
DNA repair and recombination proteins [BR:
lpn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
lpg1187 (rdgC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdgC
Motif
Other DBs
NCBI-ProteinID:
AAU27272
Pasteur:
lpg1187
UniProt:
Q5ZW99
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All DBs
Position
complement(1314772..1315716)
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AA seq
314 aa
AA seq
DB search
MIMWFNNALMFQYKLDGGCDLNHSLTEEALKPCPPHARFTYGWVPAFEQEMVHEVAGSTL
ICLGKEERILPRGVINKMLKEKIQQIEAAQGRPVKRAEKAQMAEDLEFELLPKSFCVQKK
LLAILDSVSQRLIINTSSNNQASQLTSFLRKSIPGIVIEPLNLTENLALRFAEWIHSPAT
LPDDFQLASDCLLFSLEDEKKRVHCKGYELPAEEILTLLAQGMGTAEISLIWKERIQFTL
TQDFTFKKLKSLDYLIDDFNEIRQLEEEYQRQDAALTLLSGELRELSNGLMKIFVNHAEM
KSAQIEKVAEDCTI
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
ctgattatgtggttcaataatgcactgatgtttcaatacaaactagacggtggatgtgat
ttaaaccattctttgactgaagaagcgcttaagccctgccccccccatgctcgctttact
tatggctgggttcctgcgtttgagcaggaaatggtgcatgaagtagctggtagcacgctt
atttgcctgggtaaagaagagcgaattctccctagaggagtcattaataaaatgctcaaa
gaaaaaattcagcaaatagaagcagcccagggtcgaccggtaaaacgcgcagaaaaggct
caaatggctgaggatcttgaatttgaactattgcctaaatccttctgtgttcaaaaaaaa
cttttagcgattcttgatagtgtcagtcagagattaattattaatacttcaagcaacaat
caggcgtctcagttgacttcttttttgcgtaaatcaatccctggtattgtgatagaacca
ttaaaccttaccgaaaatcttgccttgcgattcgcagaatggatccattctccagcaact
ctacctgatgactttcaattagcctccgattgtttactcttttctcttgaagatgaaaaa
aaacgagtccattgtaaaggctacgaattacctgccgaagaaatcctgactctattggct
caaggtatggggactgcagaaatctcattaatttggaaagagcggattcagttcaccttg
acgcaggattttacttttaaaaaactgaaaagccttgattatctgatcgacgattttaat
gagatcagacaattggaagaagagtatcaaagacaagatgccgcgttgaccttattaagt
ggggagttaagagaacttagtaacggattaatgaagatatttgttaatcatgcagaaatg
aaatcggctcaaattgaaaaagttgcagaagattgcacaatataa
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