Leclercia pneumoniae: KQ929_02270
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Entry
KQ929_02270 CDS
T08189
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lpnu
Leclercia pneumoniae
Pathway
lpnu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KQ929_02270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpnu03019
]
KQ929_02270
03009 Ribosome biogenesis [BR:
lpnu03009
]
KQ929_02270
Enzymes [BR:
lpnu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KQ929_02270
Messenger RNA biogenesis [BR:
lpnu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KQ929_02270
Ribosome biogenesis [BR:
lpnu03009
]
Prokaryotic type
rRNA helicases
KQ929_02270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
DRTGG
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QWW80108
LinkDB
All DBs
Position
457156..459120
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AA seq
654 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAF
SLPLLNNIDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEADLPNAELLGKRRLEKFAAKVQQQLESSDLDQYRGLLAKIQPVEEGEELD
MEALAAALLKMAQGERTLIVPPDAPMRPKREFRDRDDRFERRGDRNDRGPRGDRPERGGE
DRPRRERRDAGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGTHSTIEL
PKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPRPDRGGERRGGGERREGGRSFGGGERRE
GGRSFGGGERREGGRGPRREGAAPGAGRFSGERRENRGPRRDEGTSRRRFGGDA
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaacgatctgggttacgaaaaaccatctccgatccaggcagagtgtatcccacatctg
ctctctggtcgtgacgtgctgggcatggcccagacgggtagcggtaaaactgcggcgttc
tcgctgccgctgctgaacaacattgatccggacctgcgtgcaccgcagatcctcgttctt
gctccaacccgtgaactggctgttcaggttgctgaagcaatgactgaattctctaaacat
atgcgcggcgtaaacgtggtagccctgtacggcggccagcgttatgacgtgcagttacgc
gccctgcgccagggcccacagattgtcgtcggtacgccgggccgtctgctggatcacctg
aagcgcggtacccttgatctctctaaactgagcggtctggtactggatgaagcagatgaa
atgctgcgtatgggcttcatcgaagacgtagaaaccattatggcgcagatcccggaaggt
catcagaccgctctgttctctgcaaccatgccagaagctatccgtcgtattacccgccgc
ttcatgaaagagccgcaggaagtacgcattcagtctagcgtgaccacgcgtcctgacatc
agccagagctactggtctgtgtacggcatgcgtaaaaatgaagcgctggtacgcttcctg
gaagcggaagattttgatgcggcgattatcttcgtgcgtaccaaaaacgcgaccctggaa
gtggctgaagcgctggagcgtaacggctataacagcgcagcgctgaatggtgatatgaac
caggctctgcgtgagcagacgctggaacgtctgaaagacggtcgtctggatatcctgatt
gcaaccgacgtggcagcacgtggtctggacgttgagcgtatcagcctggttgtgaactac
gacattccaatggactccgagtcttacgttcaccgtatcggtcgtaccggtcgtgcgggt
cgtgctggccgtgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgcaacatc
gaacgcaccatgaaactgaccattccagaagcagacctgccaaacgcagagttgctgggc
aaacgccgtctggaaaaattcgccgctaaagttcagcagcagctggaaagcagcgatctg
gatcagtaccgtggtctgctggcgaagattcagccagtggaagaaggcgaagagctggat
atggaagctctggctgcggcactgctgaaaatggctcagggcgaacgtaccctgatcgtt
ccgccagatgcgccaatgcgtcctaagcgtgagttccgtgaccgtgacgaccgtttcgag
cgtcgtggtgatcgtaacgaccgtggcccacgtggcgatcgtccagagcgtggtggtgaa
gaccgtccacgtcgtgagcgtcgtgacgctggcgatatggaactgtaccgtattgaagtt
ggccgtgatgatggtgttgaagttcgtcatatcgttggcgctatcgctaacgaaggcgac
atcagcagccgttacattggtaacatcaagctgttcggtacccactcgactatcgaactg
ccgaaaggtatgccgggcgaagttctgcagcactttactcgcacccgcattctgaacaaa
ccgatgaacatgcagttgctgggcgatgctcagccgcgtcctgaccgtggcggcgaacgt
cgtggcggtggtgagcgtcgtgaaggtggtcgtagcttcggcggcggtgagcgtcgtgaa
ggtggtcgtagcttcggcggcggtgagcgtcgtgaaggcggtcgtggtcctcgtcgtgaa
ggcgctgcgccaggcgcgggtcgcttcagcggtgaacgtcgcgaaaaccgtggtccacgt
cgtgacgaaggcaccagccgtcgccgcttcggtggcgatgcgtaa
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