Leclercia pneumoniae: KQ929_04035
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Entry
KQ929_04035 CDS
T08189
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
lpnu
Leclercia pneumoniae
Brite
KEGG Orthology (KO) [BR:
lpnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpnu03016
]
KQ929_04035 (truD)
Enzymes [BR:
lpnu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
KQ929_04035 (truD)
Transfer RNA biogenesis [BR:
lpnu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KQ929_04035 (truD)
Prokaryotic type
KQ929_04035 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QWW80433
LinkDB
All DBs
Position
823251..824300
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AA seq
349 aa
AA seq
DB search
MIEFDNLTYLHGKPQSTGLLKASPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGNSMPDLSKFELEGCKVLEYARHKRK
LRLGALQGNAFTLVLREVSDRADVEKRLAAISAQGVPNYFGAQRFGIGGSNLQGALRWAQ
SNAPVRDRNKRSFWLSAARSALFNQIVSERLKKPDANQVVVGDALQLAGRGSWFVATAEE
MDDLQTRVGNKTLMITAPLPGSGEWGSVGDALSAEQSAVADAQELQSLLVREKVEAARRA
MLLYPQQLNWNWWDDVTLELRFWLPAGSFATSVVRELINTSGDYANIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaattcgacaacctcacttatctgcacggtaagccgcaaagcacgggtttacta
aaagccagcccggaagatttcgtggtggtggaagatctcggctttgagccggatggggaa
ggcgagcatatcctggtgcggatcctgaaaaacggttgtaacacccgtttcgttgccgac
gcactggcaaagttcctgaagattcatgcccgtgaagtgagctttgccgggcaaaaagat
aaacatgccgttacagagcagtggctctgcgcgcgcgttccgggcaattcgatgccggat
ctcagtaagtttgagcttgaaggttgtaaggtactggagtacgcccgccataaacgcaaa
ctgcgcctcggtgccctgcagggaaatgcgtttacgctggtgctgcgtgaagtcagcgat
cgcgccgatgtcgaaaaacgtctggcagccatcagcgcccagggcgtgcctaactacttt
ggtgcgcagcgtttcggcattggcggcagtaatctgcagggggcgctacgctgggcgcag
agtaacgcgccggttcgcgacaggaataaacgcagtttttggttgtctgcggcccgcagt
gcgttgtttaatcagattgtgagtgaaaggctgaaaaaaccagacgcgaatcaagttgtt
gtcggcgatgcgctacaattagcggggcgcggcagctggttcgtggccacggctgaagag
atggacgacctgcagacgcgcgtcggaaacaaaacgctgatgattaccgcaccgcttccg
ggctccggagagtggggaagtgtgggcgacgcgctgagcgcggagcaatctgcggtggca
gatgcgcaggaattacaatctttgctggtgcgggaaaaagtggaagcggcacgccgggcg
atgctgctctatccgcaacagttgaactggaactggtgggatgacgtaacccttgagtta
cgattctggctgccggcaggtagctttgccaccagtgttgtcagggaacttatcaacact
tcgggtgactatgcgaatattgctgagtaa
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