Leclercia pneumoniae: KQ929_09000
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Entry
KQ929_09000 CDS
T08189
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
lpnu
Leclercia pneumoniae
Brite
KEGG Orthology (KO) [BR:
lpnu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpnu03016
]
KQ929_09000
Enzymes [BR:
lpnu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
KQ929_09000
Transfer RNA biogenesis [BR:
lpnu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KQ929_09000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
Motif
Other DBs
NCBI-ProteinID:
QWW81317
UniProt:
A0ABX8JYH7
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All DBs
Position
complement(1828428..1830362)
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AA seq
644 aa
AA seq
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MLQDNPLLAQLKQQLHSQTPRTEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
VAVIHTEKERESAEPEELIEPFLTRFVGKVQRKDDRLSITPDHPLLKDAIQCRAARGVEH
DFKEGDWAVAEMRRHPLKGDRSFYAELTHFITFGDDHFVPWWVTLARHNLEKEAPNGVAT
EMLDEGLERQDLTALNFVTIDSASTEDMDDALYVEERADGKLALTVAIADPTAWVAEGSK
LDDAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRAMEVRPVLACRMTIATDGTIEDDITF
FAATIESKAKLVYDNVSDWLENSGSWQPENDAIADQIRLLHRVCQRRSEWRQTHALVFKD
RPDYRFILGDKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGIYNVHTGFD
PANTEALAALLKTHDVHVDPQEVLTLEGFCKLRRELDAQPTGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIKGETIARPGDETTLQMAERRRLNRM
AERDVGDWLYARFLNDKAGTETRFPAEIIDVSRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGETVYKVTEVIDVTIAEVRMETRSIIARPAV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaggacaacccgctgcttgcgcagctaaaacagcagcttcattctcagacgccc
cgcactgaaggggttgtaaaagccacggaaaaaggctttggcttcctcgaagtcgatgcg
cagaaaagctacttcatcccgcctccgcagatgaagaaagtgatgcacggcgaccgtatc
gtcgctgtgattcataccgaaaaggaacgcgaatccgccgagccggaagagttgatcgag
ccgttcctgacccgtttcgttggtaaggttcagagaaaagacgaccgtctttctattacg
ccggaccatcccctgttaaaagatgccattcagtgccgtgccgcacggggcgttgaacac
gatttcaaagaaggcgactgggccgttgctgaaatgcgccgccatccgctgaaaggcgat
cgctccttctatgctgaactgacccactttatcaccttcggcgacgaccacttcgtgcca
tggtgggtaaccctggcgcgccataatcttgaaaaagaggcgccaaacggcgtggcgacg
gagatgctggatgaaggtctggagcgtcaggatctgactgccctgaactttgtcaccatt
gatagcgccagcaccgaagatatggacgatgcgctgtacgtcgaagagcgtgccgatggc
aaactggcgctgacggtggctatcgccgaccctaccgcctgggttgccgaggggagcaag
ctggatgacgcggccaaaatccgtgcgttcaccaactatctgccgggctttaatatccca
atgttgccgcgtgaactctctgatgacctgtgctctctgcgcgccatggaagttcgcccg
gtgctggcttgtcgtatgaccatcgcgacggatggcaccatcgaagatgacatcaccttc
ttcgcggcaaccatcgaatcgaaagcgaagctggtgtatgacaacgtctcagactggctg
gaaaatagcggtagctggcagcctgaaaacgacgccattgccgaccagattcgtctgctg
caccgcgtatgccaacgccgtagcgaatggcgtcagactcatgcgctggtctttaaagat
cgaccagactatcgctttattctgggcgataaaggcgaagtgctggatatcgtggcagaa
ccgcgccgcattgctaaccgtatcgttgaagagtcaatgattgcggccaacatctgtgca
gcccgcgtattgcgcgacaaacttggttttggcatctacaacgtccataccggtttcgac
ccggccaacaccgaagcgctggcggctctgctcaaaacccacgatgtgcatgttgatccg
caagaggtgctaaccctcgaaggtttctgcaaattgcgtcgtgagctggatgcccagccg
accggcttcctcgacagccgtattcgtcgcttccagtcattcgcggaaatcagcaccgag
cccggtccccactttggccttggcctggaagcctacgcgacctggacctcacctattcgt
aagtatggcgacatggtgaaccatcgtctgctgaaggctatcatcaaaggcgaaaccatt
gcccgtcccggcgatgagaccaccctgcagatggccgagcgccgccgcctgaaccgcatg
gccgagcgcgatgtcggtgactggctgtatgcccgcttcctcaacgataaagccggaacg
gagacgcgtttcccggccgaaattatcgatgtcagccgtggcggcatgcgcgtacgtctg
gtggacaatggtgcggtggcgtttatccctgcaccattcctgcacgccgttcgcgacgag
ttggtctgtagccaggaaaatggcacagtgcagatcaaaggcgaaacggtgtataaggtc
accgaagtgatcgatgtcaccattgcggaagtccgtatggaaacccgcagcattatcgcc
cgccctgcggtctaa
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