KEGG   Leclercia pneumoniae: KQ929_14275
Entry
KQ929_14275       CDS       T08189                                 
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
lpnu  Leclercia pneumoniae
Pathway
lpnu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lpnu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KQ929_14275 (rhlE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lpnu03019]
    KQ929_14275 (rhlE)
Enzymes [BR:lpnu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     KQ929_14275 (rhlE)
Messenger RNA biogenesis [BR:lpnu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     KQ929_14275 (rhlE)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 UTP25 P-loop_SecA Cullin_binding
Other DBs
NCBI-ProteinID: QWW78426
LinkDB
Position
complement(2890487..2891833)
AA seq 448 aa
MSFDTLGLNPDILRAVAEQGYREPTPIQQKAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
QRLIENQPHAKGRRPVRALILTPTRELAAQVGENVREYSRYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNALKLDSVEILVLDEADRMLDMGFIHDIRRVLAKLPAR
RQNLLFSATFSDEIKSLAEKLLHNPLEVEVARRNTASEQVTQYVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGQALSLVCVDEHKLLRDI
ERLLKKEIPRIQTPGYEVDPSIKAEPIQNGRQGGGRGQGGGGRGQQQPRRTEGAAAKPAS
KPPRRDGEGKPAGEGQRRRRPRKPAAGQ
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgtcttttgatacccttggcctgaatcctgatattctgcgcgccgtcgcagagcagggc
tatcgcgaacctacccctattcagcagaaggcgatccccgccgtgctgcaaggccgtgac
ctgatggcgagcgcccagaccggtaccggtaaaaccgcaggctttacgctgccgctgctg
caacgtctgatcgagaatcagccgcatgcgaaaggccgccgtccggttcgtgccctgatt
ctgaccccaacccgtgagcttgctgctcaggtgggcgagaacgtccgtgaatacagccgc
tatctgaatattcgctcgctggtggtcttcggcggcgtgagcattaatccgcagatgatg
aaactgcgtggcggcgtggatgtgctggtggcaacgccgggccgtctgctcgatctggaa
caccagaatgcgctgaagctggatagcgtagagattctggtgctggacgaagccgaccgt
atgctggatatgggctttatccacgacatccgccgcgtactggctaaactgccggcgcgt
cgtcagaacctcctcttctctgcgaccttctcggatgagatcaaatcgctggcagaaaaa
ctgcttcacaacccgctggaagtggaagtggcgcgtcgtaacactgcgtctgagcaagtg
acccagtatgtgcactttgttgataagaagcgtaaacgcgagctgctctcccagatgatc
ggtcagggcaactggcagcaggtgctggtctttacccgcaccaagcacggtgccaaccat
ctggcagaacagctgaacaaagacggcattcgcagtgcggcgatccacggcaataagagc
cagggggcacgtacccgcgcgctggccgactttaaatcgggtgacatccgcgtactggtc
gccaccgatatcgccgcccgtggtctggatatcgaagagctgccgcacgtagtgaactac
gagctgccgaacgtgccagaagattacgttcaccgtattggccgtaccggccgtgctgcc
gccacgggtcaagcgctgtcgctggtctgcgtcgatgagcataagctgctgcgcgatatt
gagcgcctgctgaagaaagagatcccgcgcatccagactccaggttatgaagtggatccc
tctatcaaagccgaaccgatccagaacggtcgccagggcggtggacgcgggcaaggcgga
ggcggccgtggtcaacagcagccgcgccgtactgaaggggcagccgctaagcctgccagc
aaaccgccgcgccgtgatggcgaaggcaagcccgccggagaagggcagcgccgtcgccgt
ccgcgtaaaccggcggcaggacagtaa

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