Leclercia pneumoniae: KQ929_14275
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Entry
KQ929_14275 CDS
T08189
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
lpnu
Leclercia pneumoniae
Pathway
lpnu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KQ929_14275 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpnu03019
]
KQ929_14275 (rhlE)
Enzymes [BR:
lpnu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KQ929_14275 (rhlE)
Messenger RNA biogenesis [BR:
lpnu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KQ929_14275 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UTP25
P-loop_SecA
Cullin_binding
Motif
Other DBs
NCBI-ProteinID:
QWW78426
LinkDB
All DBs
Position
complement(2890487..2891833)
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AA seq
448 aa
AA seq
DB search
MSFDTLGLNPDILRAVAEQGYREPTPIQQKAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
QRLIENQPHAKGRRPVRALILTPTRELAAQVGENVREYSRYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNALKLDSVEILVLDEADRMLDMGFIHDIRRVLAKLPAR
RQNLLFSATFSDEIKSLAEKLLHNPLEVEVARRNTASEQVTQYVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGQALSLVCVDEHKLLRDI
ERLLKKEIPRIQTPGYEVDPSIKAEPIQNGRQGGGRGQGGGGRGQQQPRRTEGAAAKPAS
KPPRRDGEGKPAGEGQRRRRPRKPAAGQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgatacccttggcctgaatcctgatattctgcgcgccgtcgcagagcagggc
tatcgcgaacctacccctattcagcagaaggcgatccccgccgtgctgcaaggccgtgac
ctgatggcgagcgcccagaccggtaccggtaaaaccgcaggctttacgctgccgctgctg
caacgtctgatcgagaatcagccgcatgcgaaaggccgccgtccggttcgtgccctgatt
ctgaccccaacccgtgagcttgctgctcaggtgggcgagaacgtccgtgaatacagccgc
tatctgaatattcgctcgctggtggtcttcggcggcgtgagcattaatccgcagatgatg
aaactgcgtggcggcgtggatgtgctggtggcaacgccgggccgtctgctcgatctggaa
caccagaatgcgctgaagctggatagcgtagagattctggtgctggacgaagccgaccgt
atgctggatatgggctttatccacgacatccgccgcgtactggctaaactgccggcgcgt
cgtcagaacctcctcttctctgcgaccttctcggatgagatcaaatcgctggcagaaaaa
ctgcttcacaacccgctggaagtggaagtggcgcgtcgtaacactgcgtctgagcaagtg
acccagtatgtgcactttgttgataagaagcgtaaacgcgagctgctctcccagatgatc
ggtcagggcaactggcagcaggtgctggtctttacccgcaccaagcacggtgccaaccat
ctggcagaacagctgaacaaagacggcattcgcagtgcggcgatccacggcaataagagc
cagggggcacgtacccgcgcgctggccgactttaaatcgggtgacatccgcgtactggtc
gccaccgatatcgccgcccgtggtctggatatcgaagagctgccgcacgtagtgaactac
gagctgccgaacgtgccagaagattacgttcaccgtattggccgtaccggccgtgctgcc
gccacgggtcaagcgctgtcgctggtctgcgtcgatgagcataagctgctgcgcgatatt
gagcgcctgctgaagaaagagatcccgcgcatccagactccaggttatgaagtggatccc
tctatcaaagccgaaccgatccagaacggtcgccagggcggtggacgcgggcaaggcgga
ggcggccgtggtcaacagcagccgcgccgtactgaaggggcagccgctaagcctgccagc
aaaccgccgcgccgtgatggcgaaggcaagcccgccggagaagggcagcgccgtcgccgt
ccgcgtaaaccggcggcaggacagtaa
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