Leclercia pneumoniae: KQ929_16955
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Entry
KQ929_16955 CDS
T08189
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
lpnu
Leclercia pneumoniae
Pathway
lpnu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpnu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KQ929_16955 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpnu03019
]
KQ929_16955 (pcnB)
Enzymes [BR:
lpnu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
KQ929_16955 (pcnB)
Messenger RNA biogenesis [BR:
lpnu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KQ929_16955 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QWW81770
LinkDB
All DBs
Position
3453588..3454985
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AA seq
465 aa
AA seq
DB search
MFTRVANFCRKVLSRDESMADDVIAQHSMSVIPREQHAISRKDISENALKVLYRLNKAGY
EAYLVGGGVRDLLLGKKPKDFDVTTSATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEV
ATFRGHHEGTPTDRTTSQRGQNGMLLRDNIFGNIEEDAQRRDFTINSLYYSVADFTVRDY
VGGMQDLKEGMIRLIGNPETRYREDPVRMLRAVRFAAKLGMRISPETAEPIPRLATLIND
VPPARLFEEALKLLQAGYGFETYKLLREYSLFQPLFPIITRNFTEQGDSAMERIINQVLK
NTDTRIHSDMRVNPAFLFAAMFWYPLLETAQKIAQESGLAYYDAFALATNDVLDEACRSL
AIPKRITTLIRDIWQLQLRMSRRQGKRAWKLMEHPKFRAAYDLLALRAEAENNHELQRLA
QWWGEFQVSAPPEQKDMLTDLGDDPEPRRRHRRPRKRAPRREGAA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atttttacccgagtcgctaatttttgccgtaaggtgctaagccgcgatgagagcatggcg
gacgacgtcattgctcaacactctatgtcggttattccgcgcgagcagcatgctatttcc
cgcaaagatatcagtgaaaatgccctcaaggtactttatcgcctgaataaagcgggttac
gaagcttatctcgtagggggtggcgtgcgcgatctgctgcttggcaaaaaaccaaaagat
ttcgacgtgaccaccagtgccacgccggagcaggtgcgtaaattattccgtaactgccgg
ctggtaggtcgtcgcttccgtctcgcccacgttatgtttgggccagaaatcattgaagtc
gccactttccgtgggcaccacgaaggcacgccaactgaccgcacgacctcccagcgcggc
cagaacggtatgctgctgcgtgacaatatcttcggcaatatcgaagaagatgcccagcgc
cgcgactttaccatcaacagcctttactacagcgtggcggactttaccgttcgcgattac
gtcggcggtatgcaggatctgaaagagggaatgattcgcctgatcggcaatcctgaaacc
cgctatcgagaagatccggtgcgcatgctgcgcgcggtacgtttcgccgctaagctcgga
atgcgtatcagcccggaaaccgccgagccgatcccacgtctggcgacgcttatcaacgat
gtgccgccggcacgtctgtttgaagaggcattgaaactgctgcaggcaggctacggcttc
gaaacctataagctgctgcgtgaatacagcctgttccagccgctgttcccgatcattacc
cgcaacttcaccgagcagggtgatagcgccatggagcgcatcatcaatcaggtgctgaag
aataccgacacccgcattcacagcgatatgcgcgttaacccggccttcctctttgcggcg
atgttctggtatccgttgctggaaacggcgcagaaaattgcgcaggagagcggtctcgcc
tattacgacgcctttgcgctggcaacgaacgacgtgctggacgaagcctgccgttcgctg
gccattccaaaacgcattaccacccttatccgtgatatctggcagctccagctgcgtatg
tcacgccgccagggtaaacgcgcctggaagctgatggaacatccaaaattccgcgcggct
tacgatctgctggccctgcgtgccgaggctgagaataaccacgagctgcagcgtctggcg
cagtggtggggtgagtttcaggtctctgcgccgccggagcagaaagatatgttgaccgac
ctgggtgacgatccggaaccccgccgccgtcatcgccgtccgcgtaagcgtgctccgcgt
cgcgaaggggcagcatga
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