Leclercia pneumoniae: KQ929_19970
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Entry
KQ929_19970 CDS
T08189
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
lpnu
Leclercia pneumoniae
Pathway
lpnu00541
Biosynthesis of various nucleotide sugars
lpnu01100
Metabolic pathways
lpnu01250
Biosynthesis of nucleotide sugars
Module
lpnu_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
lpnu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KQ929_19970 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
lpnu01005
]
KQ929_19970 (rfaD)
Enzymes [BR:
lpnu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
KQ929_19970 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
lpnu01005
]
Core region
KQ929_19970 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
QWW79461
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All DBs
Position
4106181..4107113
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AA seq
310 aa
AA seq
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MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI
MAGEEFGEIEAIFHEGACSSTTEWDGKYMMDNNYQYSKEILHYCLEREIPFLYASSAATY
GGRTSDFIESREYEQPLNVYGYSKFLFDEYVRQVLPEANSLIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGESPKLFEGSDGFKRDFVYVGDVAAVNLWFWENGVSGIYNLGTGRA
ESFQAVADATLAYHKEGSIEYIPFPDKLKGRYQAFTQADLTNLRKAGYDKPFKTVAEGVT
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttaccggcggcgcaggtttcatcggaagtaacatcgttaaagcccttaat
gacaaaggcatcaccgacatcctggtggtggacaacctgaaagatggcaccaagttcgtc
aacctggtggatttgaacattgctgactatatggataaagaagatttccttatccagatt
atggcgggtgaagagttcggcgagatcgaagccatcttccacgagggggcatgctcctcc
accaccgagtgggatggcaagtacatgatggacaataactatcagtactccaaagagatc
ctgcactactgtctggaacgtgaaatcccgttcctgtatgcctcttctgcagccacctac
ggcggccgtacatctgactttatcgaatcccgcgagtatgagcagccgctgaacgtctac
ggctactccaaattcctgtttgatgaatatgtacgtcaggtgctacctgaagcaaattcc
ctgattgttggcttccgttattttaacgtctacgggccgcgtgaagggcacaaaggcagc
atggcgagcgtggcgttccacctgaacactcagctgaataacggtgaaagcccgaaattg
ttcgaaggcagcgacggcttcaagcgcgactttgtctacgtgggcgatgtggcagcggtg
aacctgtggttctgggaaaacggtgtgtccggtatctataacctgggcacaggccgcgca
gagtccttccaggcggtcgctgacgccacgctggcataccacaaagaaggcagcattgaa
tacatcccgttcccggacaaactgaaaggccgctaccaggcgttcacgcaggctgacctg
acaaacctgcgtaaagcggggtacgacaagccgttcaagaccgttgccgaaggggtaacg
gaatatatggcctggctgaaccgcgacgcgtaa
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