Legionella pneumophila subsp. pneumophila Lorraine (serogroup 1): LPO_0290
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Entry
LPO_0290 CDS
T02175
Symbol
rhlE
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
lpo
Legionella pneumophila subsp. pneumophila Lorraine (serogroup 1)
Pathway
lpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPO_0290 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpo03019
]
LPO_0290 (rhlE)
Enzymes [BR:
lpo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LPO_0290 (rhlE)
Messenger RNA biogenesis [BR:
lpo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LPO_0290 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
ERCC3_RAD25_C
UTP25_NTPase-like
Exotox-A_bind
P-loop_SecA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CCD04409
UniProt:
A0AAV2UU10
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All DBs
Position
complement(313894..315138)
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AA seq
414 aa
AA seq
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MSFKQLAMIEPLNRAVSELGYTTPTSIQLKAIPLILNGHDLLGSAQTGTGKTASFVLPIL
QKASQQTQTSPNRVKVLILTPTRELAIQVHESIIQYGKYLTLRSAVIYGGVKSHNQIKQL
DSGLEILVATPGRLLDLYQQRAVKFDEIDTLVLDEADRMLDMGFIHDIKKIIKLLPLKRQ
NLLFSATFTPEVRTLARNILNKAVEIDIAPRNTAVKTIKQTVYSVDRNHKLALLSHLLHK
NNWGQTLVFSRTKHGANKLVKQLAESQIYSVAIHGNKSQAQRTKALADFKSGKVQTLIAT
DIAARGIDIEKLACVVNFDLPHVPEDYVHRIGRTGRAGASGLAVSLVSTEEIKLLQSIEK
LINQKLERIKIKDFEFLHNFSDFVSAKIQKFAPPKAGYKGNISRKSRTAFNKSA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaaacaattagcgatgattgagccgctaaacagggcagttagtgagttaggc
tacactactcctaccagtattcaattaaaagccatcccgctcattttaaatgggcatgat
ttacttggttccgctcaaacaggaacaggaaaaacagcaagctttgtattgcctatcttg
caaaaagccagtcagcaaactcaaaccagccctaatcgagttaaagtactgattttaacg
cctacacgtgaattagccatccaggtccacgagagcataatccaatatggcaaataccta
acactgcgctcggctgtgatttacggaggagtaaaaagccacaaccaaattaaacaatta
gactcaggccttgagatactggttgcaacaccgggaagattattggatttatatcagcaa
cgtgctgttaaatttgatgagattgacaccctggtactcgatgaggcggatagaatgctg
gatatggggtttattcatgatataaaaaaaattatcaaattattacctttaaaaaggcag
aacctgcttttttcagcaacctttacccctgaagtacgcactttagccagaaatatactg
aataaagcggttgaaattgatatcgcaccgagaaataccgcggtaaaaaccataaaacaa
actgtttattcagtagatagaaaccataagttagcccttctgagtcatttacttcataag
aataactggggacaaactttggttttttctcgaaccaaacatggagccaataaactggtt
aagcaactggccgaatcccaaatatattcggttgctattcatggcaacaaatcacaggct
caacgaacaaaagccttggctgatttcaagtcaggcaaagtacaaacactaattgcaaca
gacatcgcagcacgtggcatagacatcgagaaacttgcctgtgtagtgaattttgacctg
cctcatgtgcctgaggactacgttcatcggattggacgaacaggacgggcaggcgcctct
ggattagctgtatccttggtcagcacagaagaaatcaaactgctgcagtctatagaaaaa
ttaatcaatcaaaaattggagcgcattaaaattaaggattttgagtttttacataacttt
tcagatttcgtttcagccaaaattcaaaaatttgcgccgccaaaagcaggatataagggc
aatatcagcagaaaatcgaggacggcttttaataaaagcgcgtaa
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