Legionella pneumophila subsp. pneumophila Lorraine (serogroup 1): LPO_2270
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Entry
LPO_2270 CDS
T02175
Name
(GenBank) replication factor C subunit (activator I)
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
lpo
Legionella pneumophila subsp. pneumophila Lorraine (serogroup 1)
Brite
KEGG Orthology (KO) [BR:
lpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lpo03016
]
LPO_2270
Enzymes [BR:
lpo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
LPO_2270
Transfer RNA biogenesis [BR:
lpo03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
LPO_2270
Prokaryotic type
tRNA splicing ligases
LPO_2270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
CCD06253
UniProt:
A0AAV2V0V2
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All DBs
Position
complement(2391088..2392518)
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AA seq
476 aa
AA seq
DB search
MDLSLLKKINDFEWQIPQHGKMLVPGVIFASEQLILDMDMKVYEQLSNVATLPGIVSAAY
AMPDAHWGYGFPIGGVAAFDPDDGGVISAGGVGFDISCGVRLLSTGLKRDELESVKVSLA
DSLFTHIPAGVGSRSGIHLTIKQLDDMMRGGAQWAVKQGYGEAADLERIEDRGCVEGAIP
DFVSEQAKKRQKNEMGTLGSGNHYLEVQEVRQIYCSDTAAALNLHEGDIVVSIHCGSRGL
GHQIGTDYLRSMVIESQHYGVKLADRELACAPIHSKLGENYLGAMRAGINCALANREIIT
HFMRNVFQDILPRTQIDLIYDVSHNTCKEEFHEVDGKKKCLFVHRKGATRALGPGHPQLP
KAVSHIGQPVIIGGSMGTGSYVLAGVKGSEHKSFSSACHGAGRAMSRHQAMKKWNGKDIV
DNLAQQGILIRSGSYRGVAEEAPGAYKDVHSIVDAAEMSGLAKKVAKLIPIICVKG
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggatttaagtctcttgaaaaaaataaatgattttgaatggcaaataccgcaacatgga
aagatgttggtgccaggagttattttcgcttcagaacagctgattcttgatatggatatg
aaagtttacgaacaattatctaatgttgctactttgccgggaattgtttctgctgcatat
gccatgcctgatgcgcattggggatatggttttccgattggcggtgtcgctgcttttgat
ccggatgatggaggggttatttcagcaggtggtgtgggctttgacatttcatgcggagtg
aggctcttatctactggattgaagcgagatgaattggagtctgtcaaagttagccttgca
gactctttatttactcatattccagctggagtaggtagtagaagcggcattcatttaact
atcaaacagctcgatgatatgatgcgagggggcgcacagtgggcggtaaaacaaggctat
ggtgaagctgctgatttagagcgtatcgaggatcgcggttgtgtggaaggagctatccct
gattttgtctctgagcaagctaaaaagcgccagaaaaatgaaatgggtaccttgggttca
ggtaatcattatctggaagtgcaggaagtcaggcaaatctactgttccgatacagcagcg
gctttaaatttgcatgaaggggatattgtagtgagtatccattgtggttccagaggattg
gggcatcaaattggtacagattacctccgttctatggttattgaatcacaacattatggt
gtcaagctggcggacagggaattggcttgtgctcctattcattcaaagctaggggaaaat
tacctgggcgctatgagagcaggaataaattgcgctttagccaacagagaaatcatcact
cattttatgcgcaatgtgtttcaggatattttaccccgcactcagattgatctaatctat
gatgtttctcacaatacttgtaaagaagaatttcatgaggtagatggcaagaaaaagtgc
ttatttgttcatcgaaaaggagcaactcgtgccttgggcccaggtcatccacaactacct
aaagctgtttctcatataggccagcctgtgattattggagggagcatgggaacaggttcc
tatgtattagcaggtgtcaaaggttctgagcataaatcttttagctcggcatgtcatgga
gcaggtcgcgctatgagtcgtcatcaggcgatgaagaaatggaatgggaaagacatagta
gataacttggctcaacaagggattttaattcgtagcggatcatatcgcggggttgctgag
gaagctcccggggcttataaagatgttcattctattgttgatgccgctgaaatgtcgggt
ttggcaaaaaaagttgctaaattaattcccatcatttgtgtcaaaggttaa
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