Legionella pneumophila subsp. pneumophila Lorraine (serogroup 1): LPO_2424
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Entry
LPO_2424 CDS
T02175
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
lpo
Legionella pneumophila subsp. pneumophila Lorraine (serogroup 1)
Pathway
lpo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPO_2424 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpo03019
]
LPO_2424 (deaD)
03009 Ribosome biogenesis [BR:
lpo03009
]
LPO_2424 (deaD)
Enzymes [BR:
lpo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LPO_2424 (deaD)
Messenger RNA biogenesis [BR:
lpo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LPO_2424 (deaD)
Ribosome biogenesis [BR:
lpo03009
]
Prokaryotic type
rRNA helicases
LPO_2424 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Helicase_C_2
Cas3-like_C_2
AAA_19
adh_short
NMT1_2
Motif
Other DBs
NCBI-ProteinID:
CCD06401
UniProt:
A0AAV2UYB7
LinkDB
All DBs
Position
complement(2553455..2555155)
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AA seq
566 aa
AA seq
DB search
MKFITPSPIQAQTIPLILQGRDAIALAQTGTGKTAAFALPILQNLSPEISTTQALILAPT
RELAIQVAEQFELLSKYQRNVTIAVLCGGQEYGRQLKQLRSGAQVVVGTPGRILDHIDKG
TLLLNNLKTFILDEADEMLRMGFIEDVETILEKLPEKKQMALFSATMPYRIRQIANTYLN
DPASIEIRMETATVKSIEQRFLFASVHQKPDALIRVLEVEDYQGVIVFVRTKSSTEEVAE
LLQQHGLRAMAIHGDITQSLRERIIAQFKQGAIDILVATDVAARGLDVERVTHVINYDMP
HDNETYVHRIGRTGRAGRSGVTILFVTPKESRLISSIERHTRQRIEKVQVPNDHMIQMAR
QQRFMSNITTRLNHEHVYSYKRIVEEYIKEHDVSAVDVAAALALLLHKDMPWRKELNMPK
AASAFKEERARAGEKGLDLRGRFKEDRKSSFADRKGARGSKKDFAKDFSNERKKFNDGRK
AVNQESVAQDLFRIDVGKIHGVKPGNIVGAIANEAGLQSRYITGLKIHEDHSTVRLPKGM
PKEVMKDLTKAWVCGRQLNLTLIGSA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttattacgccatcgcctatccaggctcaaaccattcctttgatattgcaaggt
cgtgatgccattgctcttgcgcaaactggtacaggtaaaacagcggcttttgcattacca
attttgcaaaatttgtcccctgagatatctaccactcaggctttgattttagcccctact
cgtgaattggcaatccaggttgcagagcaatttgaattattaagcaagtaccaacgcaat
gtgacgattgctgttctttgcggtgggcaagaatatggtcgtcaattaaaacaattgcgt
agtggtgcgcaagtggttgttggaacgccaggacgtattctggaccatatcgataaaggt
accttactcttaaataatctgaagacatttattcttgatgaagcagatgaaatgttgcgt
atgggtttcattgaagatgtagaaaccattttagaaaaactgcctgaaaaaaagcaaatg
gcattgttttcagcaaccatgccctatcgaattcgtcaaatagccaatacttatttgaat
gaccctgcctcaattgaaatccgtatggaaactgcgacggtcaagtctattgagcaacgg
tttttatttgcttccgtacatcaaaaaccggatgcgttaatccgggtcttggaagtggag
gattatcaaggggttatcgtttttgtacgcactaaaagcagtactgaggaagtagcagaa
ctattgcaacaacatggattaagagcaatggcaattcatggtgatattactcagtctttg
cgtgagcggattattgcccaatttaaacaaggagcgattgatattctggtggcgacggat
gtcgctgcaagaggtttggatgtcgagcgagttactcatgtgattaattatgatatgcca
catgataatgaaacttatgttcacagaattggcagaacagggagggctggccgttctggt
gttacgattttatttgtaactcccaaggagtcgcgtttaatttccagcattgaacgccat
accaggcaacgaattgagaaagttcaagttcctaatgaccatatgatacagatggctcgt
caacaaagattcatgtctaacattactactcgactgaatcatgagcatgtgtattcctac
aaaaggattgtagaagaatacattaaagagcatgacgtatcagcagtagatgttgcggct
gctcttgctttattgctgcataaagacatgccttggagaaaagaattgaatatgcctaaa
gcagcttcagcattcaaagaagagagagctcgggcaggagaaaaaggattggatttacgt
ggtcgatttaaggaagatagaaaaagttcttttgctgatcggaaaggtgcgcgaggaagc
aagaaagattttgccaaagacttttctaatgaaagaaaaaaatttaatgatggcaggaag
gccgttaatcaagaatcagtagcccaggatttatttcgtattgatgtaggcaaaattcat
ggagtcaaacctggcaacatagtaggggctattgctaatgaggctggcctgcaaagccga
tatattactggtcttaaaattcatgaagatcactctactgttcgtttaccaaaaggaatg
ccaaaagaagtgatgaaggacttaaccaaggcttgggtttgtggccgccaactcaattta
acattaattggtagtgcctga
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