Legionella pneumophila subsp. pneumophila Lorraine (serogroup 1): LPO_3283
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Entry
LPO_3283 CDS
T02175
Symbol
himD
Name
(GenBank) integration host factor (IHF), DNA-binding protein, beta subunit
KO
K05788
integration host factor subunit beta
Organism
lpo
Legionella pneumophila subsp. pneumophila Lorraine (serogroup 1)
Brite
KEGG Orthology (KO) [BR:
lpo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lpo03032
]
LPO_3283 (himD)
03036 Chromosome and associated proteins [BR:
lpo03036
]
LPO_3283 (himD)
03400 DNA repair and recombination proteins [BR:
lpo03400
]
LPO_3283 (himD)
DNA replication proteins [BR:
lpo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LPO_3283 (himD)
Chromosome and associated proteins [BR:
lpo03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
LPO_3283 (himD)
DNA repair and recombination proteins [BR:
lpo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
LPO_3283 (himD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
CCD07203
UniProt:
A0A3A6UYJ7
LinkDB
All DBs
Position
3410028..3410339
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AA seq
103 aa
AA seq
DB search
MIKSELIEHIAARMTHLTEKQVADGINRILELMSEALIHGQRIEIRGFGSFSLHYRPPRN
AHNPKTGEKVVTEAKYSPHFKPGKELRERVNSSRAKFPLLDKD
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgattaaatccgaactcattgaacacatcgctgctcgaatgacgcatcttactgaaaag
caagtagccgatggcatcaacagaatacttgaattaatgagtgaagcacttatccatggc
cagagaatagaaattcgtggctttggcagtttttctcttcattaccgaccaccgcgaaat
gctcataatcctaaaacgggtgaaaaagtagtaacagaggcaaaatacagtcctcacttt
aaacctggaaaggaattacgagagcgggtcaattcgtcgcgagccaagttcccacttttg
gataaagattaa
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