Limulus polyphemus (Atlantic horseshoe crab): 106457235
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Entry
106457235 CDS
T08968
Name
(RefSeq) vacuolar protein sorting-associated protein 13-like
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lpol04131
]
106457235
Membrane trafficking [BR:
lpol04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
106457235
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
Motif
Other DBs
NCBI-GeneID:
106457235
NCBI-ProteinID:
XP_022238777
UniProt:
A0ABM1S572
LinkDB
All DBs
Position
Unknown
AA seq
3223 aa
AA seq
DB search
MFESIVVDLLNRFLGDYVENLDRSQLKLAIWGGDITLKNLDIKQNALNELDLPVKVVSGH
LGELVLKIPWKNIYSAPVTAKIDGLYVVVTPNASQRYNEDKEKKMAQEAKKKELQRIEDA
KAREAQKDKDKEQKQDTFTEKLVTQIIRNLQVKIMNIHVRYEDNFTNPASPFAVGISLHS
LFFETTDENWKPCVIQEAVKMFNKLVTLDSLGVYWNSNVELLSEMNYADRKSAMIRIIAS
KEYKPMNVSYLLGPISLTAKMILNPKPETDGSNFSIPKVQLDITIEDIAIGMSKSQYQDV
IRLLEALDRMTLASMYKKYRPDEPYKDNAKVWWKFGVTCVLEEDIRRRQRNWSWVHMQQH
RTTCRKYKELYKQKLMSKKISQGIQQQIDECENELDIFNITIMRKQAEVEVSREMKNKAS
QSGGWFSWWFGGGQKAQETTAGVGGEIVKKIDDAMTEQEKAQLYEAIGYQENAAPAEYPK
EFIENKLFFQLNNFVILIKDDTKTTKEVMTINLSNVSSSIEHRPSAEAIKVGVQLEGFTI
NGVVSSNGKRPQMVKVEKLGTPEKSALLQVLFETNPLDQSCDQRLNLATMPLEIVYDACT
INDLIEVFKPPQTVSLYQLQAAAAIKLEDFKEQSALGLQYAIEQHKNLDLNIDIKPSYIV
IPENGAFEKSPNLLVINLGNFQMQSIKTEIGDSVSVKSLVKAGSTDKEVLEAMITQAYDK
FHISIQNISILLSRADTDWKSLTKEEMSDTHLLHPVSVDVNFMKAIIADDPRMPKIKISG
ELPLLNLSVSDQKLKNLMKLGQSIPLPENQPEPKVENIEVTTTASKDGAQVQAKALKQVT
RPETLVIHEEQSEDKEETGIKEKDAGQFTDLQLNFEIKRIAIDISHQVGGKEKEMISFGI
HRLGTSVCMRTFDMSVDVLLGGISLEHKEYSTPDGKELYLLNTPLTSSESSNLLTLQYVQ
ADKKGPLFTTHYESTVQRIIVRFTQLDIVLHQDALLSLMKFTTNLTGELQQPRQPQKPAV
MASASEVSAEKQIVQKSKEEMKPFKKKPKDDGVIDIKLDANLSSLGISICTSKIKITNMQ
IRGLDAQVKVLKSKTMLVACLKELLVTDSTTNAAYPNILSTVSGDLLNVDVVVFNQATED
ENYSDMSAVDLKLKLSLGAIKLVFLNRYVSKILNFISEFDTAKEKVAEASVAAAEMAKHG
LEDAYEKATRVSLDIHLKAPVIIIPQNFSSQTVLVADLGTLKLCNKFEKGNVTSETGMPA
VFDKLFLEFCNLKLSTAVVDTISGNILGEATLLEPINMSLEVTRNLAIGWFKKVPEMDIK
GKLAAVKMIISQEDVTIIMKILGENLGDVEPSDSSLESLNKGTTIEKPTNQKEVPVQQHL
EEKAKDSDSIHPVFKKMTFAFHLDSLMACLFEGSSELSSGFSKRNPECALAQFELLTIAV
KGEMLSDTSLWANVILVNCILDDKRSIRTKGITRLMQCVSTEDDIQNMIDVTFRQESSLD
KFLDARISSFNLIVNLGYLMALGDFFLKAMPESPPPKPTTTTSSTELKSSVVSDQVVSVP
KASTTINLQIKQPDIILIEDMEDYNSNAVILNLQMVAKVRSSPDSQIISGSLSRLQLFTA
CFNPELRSQTTSEILSPCDISLHCSSPGMKGQHVNIEFSSILLNVSPNIIFILTKILSGL
SPQQSSEELEINKPSQDYSNLWLAKKLEECSFWFLETLDPAKEVLEDSILTIDEAVETDI
DSEVLMLKMSTISLTVAIGRGKQTVPMVLIEAGFQAEVQNWSSFLHVGSIFFMEIAYYNE
KLALWEPLLEQVEQPVGGSKPWELRMEVTKNPELPEPPAEEGETTEICFQPPVMSISVIS
IDVMELTVSKVALEVLTNLGQAFGEAVNQAHGNKLEQPDAPYVVKNNLGIPMSVLLNNDS
FQVVGQEESGFKEVLLEPDTTVCLNQSSSSDVIESHTSILKKQNVKMEEVLCIKIETDQI
NIVRKINIAQVGKRYFQLPHKTSPGDQWGFVTDVISSYGSKIITFQSCITVRNHISVAME
LYYMRPGGNELEMCGVIEPEKISFVPLYAVYCPTSELFFKPAEGTYNVCMEPFVWKDLVN
EPGTSKTLHCGGRNTGERSFYLKVFGEVEQVLFEDSTKRTMISTCYILHLQPTASLRNLL
PLVINYTIQGVDEEFVLEEGKTHDLTSADPGKTFLHIKLPDYVEQSWTCSKELNPDVDEL
TVWTFSSKSLDKELTLDLGMHTRKTTGYLDMEIYCPFWMINKTNLHITYKGEEQNTTSHP
GNLNIPLLFSFRAKNFFSKKKASLKVEDSDWSDKFAVDAVGSSGSVAAKVKDGKTYCLGV
QIVLGQASLTKVVVFTPFYLLTNNCKFDIECKEDLESAQWFTIVAGECVPFWPDQTKKPE
MVVRYAGSQDQTAPFSFKEPHSNLLRLAGTKGAIYVDCQVGESSTVLTFCDYYDGSAQVR
LVNHTDKFTIEYLQSGKKEKHQLAPLHSVLYTWEDPLGKKELTWSCGKKTNEKNSLIQDG
IEGFNADKDSKVYWVSFLDGLQRTLMFTEDIALATAAQEAGELERIEQEITISLQGVGIS
LVDNDSRSEIVYISLANSGVLWEQCKLKSRRYKPVSLKENLIIENGYQKFLKEIKAGKTP
KPKQSLESKLEIDYSEMMMYKPNKRNIRRTFQVGLWAQYCTSPHQLQLHAKINKLQIDNQ
LSDCVFPVVIAPVPPPKSVAADSAPKPFTEVSIMMRIAEHSLINQFKYFKVLIQEFHVKV
DQSFLNSLISFFSPKEQIQTNHEELLDKDKEALKKDLKVFATTYSSQEQKSFYDILHFSP
IKVHLSFSMTGGSSDPNQPTPIHSDFINLLLQSVGVTVTEIQDVIFKLNFFEKKHSFFTQ
KQLVSDATMHYTGQALKQLYVLVLGLDVIGNPVGLLLGISEGVGDFFYEPFQGAIQGPEE
FAEGLAIGVKSLFGHAVGGAAGAVSRITGTLGKGLAALTMDQEYQKKRRQQINKRPGDVR
QGLAQGGKGFVMGVFEGVTGVVTKPMEGAKEEGVGGFFKGVGKGLIGVVARPTVGAVDLA
SSGLEAVKKVTELSDEIKRARCPRYIHPDAIIRPYSRLESEGNQLLQEVEKGRFATTDDY
VAHLPVGADGKNHLLVTNRRVMFISRGDIFGQWNTEWQLTWSEIKETPQITEKGIKFLLK
EPKKKKLGGLFGGGETGRVVHIRDPQLCTWIVGKIEEAIKRSA
NT seq
9672 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagagtattgtagtagacttgctcaacagatttcttggagattatgttgaaaat
ttggatcgttcgcagttaaagcttgcaatatggggaggtgatatcactctgaaaaatctt
gatatcaaacagaatgcactgaatgaactagatcttccagtaaaagttgtttcaggtcat
ttgggtgaacttgttctaaagattccatggaaaaacatttattcagctcctgttactgcc
aaaattgatggattatatgttgttgttactccaaatgctagtcagaggtacaatgaagat
aaagagaagaaaatggcccaagaggcaaaaaaaaaagaacttcaaagaattgaggatgca
aaagctagggaagcacagaaagataaagacaaagagcagaagcaagatacttttacagaa
aagctggtcacccagataattcgcaatttacaggtgaaaattatgaatattcatgttcgg
tatgaagataatttcactaatcctgccagtccctttgctgttggtatatctcttcatagc
ttgttttttgaaacaacagatgagaattggaaaccatgtgtcatccaggaagctgtaaaa
atgtttaataagcttgtgactttagatagtttgggagtgtattggaacagcaatgtagaa
cttctcagtgaaatgaactatgctgacaggaaaagtgcaatgatacgaattattgcttcc
aaggaatataagcctatgaatgtttcctatctgcttggacctataagccttacagcaaaa
atgatattaaatccaaaaccagaaactgatgggtcaaatttttccattcctaaagttcag
ttggacataacaattgaggatattgccattggaatgagtaaatcacaatatcaagatgtt
atacgactcttagaggctctggatcgaatgacattagcatctatgtataagaaatacaga
ccagatgaaccttacaaagataatgcaaaagtatggtggaaatttggtgttacttgtgtt
ctcgaagaagatataagaagaagacaaagaaattggtcatgggtacacatgcagcagcat
cgaacaacttgtcgtaaatataaagaactgtataaacaaaaacttatgtccaaaaaaata
tcacaaggtattcaacaacagattgatgaatgtgaaaatgaactggatatttttaatata
accattatgcgaaaacaagcagaagtggaagtttcacgtgaaatgaaaaacaaagcatca
cagtctggtgggtggtttagctggtggtttggtggaggtcagaaagctcaagaaacaact
gctggtgttggaggggaaattgttaaaaaaattgatgatgctatgacagaacaagaaaag
gcacaactttatgaagccattggttatcaagaaaatgctgctccagcagagtatccaaag
gagttcattgaaaacaagctattttttcaattgaacaattttgtcatcttaatcaaagat
gacacaaaaacaacaaaagaagtaatgacaattaacttaagtaatgtttcaagttcaatt
gaacacagaccatctgcagaggcaatcaaagtgggtgtgcagttggaaggttttactatt
aatggagtagtatcatcaaatggaaaaagaccacaaatggtaaaggttgaaaaattaggt
acaccagaaaagagtgctttgcttcaagtgctctttgaaacaaatcctttagaccagtca
tgtgatcaaagactaaatttggcaacaatgccactggaaatagtttatgatgcttgtacc
ataaatgacttgattgaagtatttaagcctcctcaaacagtatcactttatcaattgcag
gctgctgctgcaataaaactggaagattttaaggagcaatcagcacttggattacagtat
gctattgagcagcacaagaatttagatctaaatattgacatcaaaccttcttatattgtc
attccagaaaatggagcttttgaaaaaagtccaaatcttttggtgattaaccttggaaat
tttcaaatgcagtctatcaaaacagaaataggagattcagtatcagtcaaaagtttggtt
aaagcaggaagtacagataaagaagttttggaagcaatgattactcaagcatatgacaag
ttccatattagcatacagaacataagtatattactttccagagctgacactgattggaaa
agcctaacaaaagaagaaatgtcagacactcatttgttacatccagtttctgtggatgtc
aacttcatgaaagcaataatagcagatgatcctcggatgcccaaaattaaaatctctgga
gaactaccacttttgaatctatctgtatctgaccagaaactaaagaatttgatgaaactt
ggacagagtattccacttcctgaaaatcagccagaacctaaagtagaaaatatagaagtt
actactactgcttcaaaggatggtgctcaggtacaagctaaagctctaaaacaagtcact
cggccagaaacattggtaatccatgaggagcagagtgaagataaggaggaaactggaata
aaggaaaaagatgctggtcagtttactgaccttcaattaaattttgagataaaaagaata
gcaattgacatatctcaccaggtaggtgggaaagaaaaagaaatgataagttttggtatt
catagacttggaactagtgtctgtatgcgcacttttgacatgagtgtagatgttctgtta
ggtggaatttctttggagcataaggaatactcaacaccagatggaaaagaactttacctg
cttaacactccattgacttccagtgaatcaagtaacctcttaacattacagtatgtgcag
gctgacaaaaaaggaccactttttactacacactatgaatccacagtacagaggattatt
gtcagatttacacaactagatatagttttacaccaggatgctttactctctttaatgaaa
tttacaactaacctaacaggagagttgcagcaacctagacaaccacagaaaccagcagta
atggctagtgcttcagaggtttcagcagaaaagcaaattgtgcaaaaatcaaaagaagaa
atgaagccctttaaaaagaaacctaaagatgatggtgttattgatataaaacttgatgct
aatttatcttctctggggatttcaatttgtaccagtaaaattaaaattaccaatatgcag
atcagaggattagatgctcaagtgaaagttcttaaatctaaaacaatgttagttgcttgc
ttgaaagagcttttagttactgactcaacaacaaatgctgcatatccaaacatcctgtct
actgttagtggagatcttttgaatgtggacgttgtcgtcttcaatcaagcaacagaagat
gaaaattattcagacatgtcagctgtggacctgaaactgaagttatctcttggagcaata
aaacttgtttttctaaatcgatatgtttccaagatactgaattttattagtgagtttgat
acagcaaaagaaaaggtagcagaggcaagtgtggcagcagcagagatggccaaacatggg
ctggaagatgcatatgaaaaggcaacaagagtttcattagatatacaccttaaagctcct
gttataataattccacaaaattttagttctcaaacagttcttgtagcagacttaggaaca
ctgaaattgtgcaataagtttgaaaaggggaatgtgactagtgaaacaggaatgccagca
gtatttgataagctgtttttggaattttgtaatttgaaactttctactgcagttgttgat
actatatcaggaaatattctaggagaagctactttgctggaacccatcaatatgagtttg
gaagtaactcgtaacctagcaataggttggtttaagaaggtcccagaaatggacatcaaa
ggaaagcttgctgctgtcaagatgattataagtcaagaagatgtcactattattatgaaa
attttgggtgaaaatcttggtgatgtagaaccaagtgattcttcattagaatctttgaat
aaaggtacaacaattgaaaaacctacaaaccaaaaggaagtacctgtacaacaacaccta
gaagagaaggcaaaagattctgattctattcatccagtttttaaaaaaatgacatttgct
tttcatctggacagtttaatggcttgtttgtttgagggaagctcagaactttcttcaggg
ttttcaaaaaggaatcctgaatgtgcactggctcagtttgagctcttgaccatagcagta
aaaggagaaatgctgagtgatacctctctttgggcaaatgtcattcttgtgaactgcatc
ttagatgacaagcgatctatcagaactaagggaatcaccaggttaatgcagtgtgtttca
accgaagatgatattcaaaatatgattgatgttacttttcgacaagagtcaagtttagac
aaatttctggatgccagaatatcaagtttcaatctaattgttaacttgggttatttgatg
gcattgggagatttctttttaaaagctatgccagaaagtcctccaccaaaacctactacc
accacttcatctacagaattaaagtcttcagttgtttcagatcaggtagtcagtgtccct
aaagcaagcacaactataaacctacaaattaaacagccagatataatactaattgaagac
atggaggactataattctaatgctgttattctgaaccttcaaatggttgctaaagttcga
tcatcaccagactctcaaataatttctggctcactttccaggcttcaactttttacagca
tgttttaatcctgaattgagatcccaaacaacatcagaaattttaagtccctgtgacatc
agtcttcactgcagttcaccaggcatgaaaggccaacatgtgaatattgaattctcgagt
attcttcttaatgtttctccaaacattatatttatattaacaaaaattctgtcaggcctg
tctccacaacaaagttcagaagagctagaaataaataagccttctcaagattattctaat
ttgtggttggcaaaaaaacttgaagaatgttctttttggtttctagaaactttggatcca
gcaaaagaagtattagaagatagcattttaactattgatgaagctgtagagacagatata
gattcagaagtgcttatgctaaaaatgagcacaatatcattaacagttgctattggtaga
ggaaaacagacagttcctatggttttgatagaagctggtttccaggcagaagttcaaaac
tggagttcattccttcatgttggctcaatcttttttatggaaattgcttattacaatgaa
aagctagcattatgggaacctcttcttgagcaagttgaacaaccagtaggaggatcaaaa
ccttgggaattaagaatggaagtgaccaaaaatcctgaattaccagaaccacctgctgaa
gagggagaaacaacagaaatttgttttcaacctccagttatgagcattagtgtaatctct
attgatgtaatggagttgacagtaagtaaagttgcattagaggtcctgactaacctagga
caagcttttggggaagcagttaaccaagcccatggaaataaactagaacaaccagatgct
ccatatgttgtgaaaaacaacttgggaattccaatgtctgttttgctgaataatgatagt
tttcaggtagttgggcaagaagagtctggtttcaaagaggtgttactagagcctgatacc
acagtatgtctaaaccaatcttcttccagtgatgttatagaaagccatacatccattcta
aaaaagcagaatgtaaaaatggaagaagtactttgcattaagattgaaacagatcaaatc
aacattgttcgtaaaatcaacattgctcaagttggcaaacgatattttcaactacctcat
aaaacctccccaggtgatcagtggggctttgttacagatgttatttcatcatatggttca
aaaattattacttttcaatcttgcataaccgtgagaaatcacatttcagttgcaatggaa
ctgtattatatgagaccaggaggaaatgaactagaaatgtgtggtgttatagaacctgaa
aagatatcttttgttccactgtatgccgtatattgtcctactagtgaattattctttaaa
cctgctgaaggtacatataatgtttgtatggagccatttgtttggaaggacctagtgaat
gaacctggaacttcaaaaacactgcattgtggtggtcgtaacactggagaacgaagcttt
tatctcaaagtatttggagaagttgaacaagtactctttgaagactctacaaaaagaact
atgatcagtacttgctacattttgcatttgcaaccaactgcatcattgagaaatttactt
ccactagttattaactacactatacaaggagtggatgaggaatttgttttggaagaaggt
aagacccatgatcttacctcagctgatccaggtaaaacattcttgcatatcaagttacct
gattatgtagagcaaagctggacttgcagtaaagaactaaatcctgatgtcgacgaactc
actgtttggacattttcatcaaaaagtttggataaagaactgactttagatcttggtatg
catacacggaaaactactggttatttggatatggaaatttactgtcccttttggatgata
aataaaacaaacttacatataacatacaaaggagaagaacaaaatacaactagtcatcca
ggaaacctaaatatccccttattgttttcattcagagccaaaaatttcttttctaagaaa
aaagcttctttgaaagtagaagattcagattggtcagataaatttgcagtagatgctgta
ggaagtagtggttcagttgctgcaaaggtgaaagatggtaagacatactgtttaggggta
caaattgtacttggccaagctagtttgactaaagtagttgtgttcacaccattttatttg
ttaacaaacaactgtaaatttgatattgaatgtaaagaagacctagagtcagcacagtgg
tttactatcgttgctggagaatgtgttccattttggcctgatcaaaccaagaaaccagaa
atggtggtaaggtatgctgggagtcaagatcagactgcacctttttccttcaaggaacca
cattccaatttattaaggctagctggtacaaaaggtgcaatatatgtggattgtcaggtt
ggtgaatcttcaactgtacttacgttttgtgattactatgatggatcagcccaagttcga
cttgtcaatcacacagacaaatttactatagaatatcttcaaagtggcaaaaaagagaaa
caccagttggcaccacttcatagtgtcctttacacatgggaagatcctctaggtaaaaaa
gaacttacttggtcatgtggaaagaaaaccaatgaaaaaaacagtcttattcaagatgga
attgaaggctttaatgctgataaagactcaaaagtatattgggtatcttttttggatgga
ttacaacgaactctaatgtttacagaagatattgctttggcaactgctgctcaagaagca
ggagagctagagcgtattgagcaagaaataaccatttctctgcagggagtgggaatttct
cttgtagacaatgatagtagatctgaaattgtttatattagtttagctaattcaggagtg
ctctgggaacaatgcaagttaaaaagtcgtagatataaacccgtaagtttaaaagaaaat
ctaataattgagaatggttaccaaaagtttttgaaagaaattaaagctggaaaaacacca
aaaccaaaacaatctcttgaaagtaaattagaaatagattattctgaaatgatgatgtat
aaacccaacaaaaggaacattagaagaacgtttcaagtaggtctatgggctcaatattgt
acatcacctcatcaattgcagcttcatgccaagattaacaaattgcagattgataaccaa
ctatctgactgtgtatttccagttgttattgctccagtaccacctccaaagtctgttgct
gctgacagtgctcctaagccttttactgaggttagtattatgatgaggatcgcagaacac
agcctaatcaatcaattcaaatactttaaagtattgatacaagaatttcatgtgaaagta
gaccagagctttctaaattctttgatttcttttttttctcctaaagaacaaattcaaaca
aatcatgaagaactccttgataaagacaaagaagccttaaagaaagacttgaaggtgttt
gctacaacatattcttctcaggagcaaaagagcttttatgacattcttcatttctcacca
attaaagtacatctaagtttctccatgacaggaggtagtagtgatcctaatcaaccaact
cctattcattctgatttcataaatcttcttctacagagtgtaggggtcacagtaactgaa
atacaggatgtgatatttaaactgaatttctttgagaaaaagcactcttttttcactcag
aaacagcttgtttcagatgccactatgcattacactggacaagctcttaaacaactttat
gtgttggtacttgggcttgatgttattggtaaccctgtaggattattgctaggaattagt
gaaggagtgggtgacttcttttatgagccattccaaggggcgattcagggtcctgaggag
tttgcagaaggacttgcaataggtgttaaaagtttgtttgggcatgctgttggaggggct
gctggagctgtctctcgtatcacagggactctaggtaagggcctggctgccctcacaatg
gatcaagagtaccagaagaagagaaggcagcaaattaacaaacgacctggagacgttaga
caaggtctagcacaaggtggaaagggatttgtcatgggagtatttgaaggagtcacagga
gtagtaaccaaaccaatggaaggtgcaaaggaagagggagttggaggatttttcaaaggt
gttggaaaaggcttgattggagttgttgctcgtccaacagttggtgctgttgatttagct
agctcaggtctagaagctgtaaaaaaagtgactgaactttctgatgaaattaaaagagca
aggtgtcctcgctacatccacccagatgcgattattaggccatacagtcgtcttgaatct
gagggaaatcaacttttgcaggaagttgaaaaggggcgttttgctactacagatgattat
gtggctcatcttccagttggcgctgatggtaaaaatcatttactggtgacgaacagaaga
gtaatgttcatatccagaggagatatttttggccagtggaacacagaatggcagctgact
tggagtgaaattaaagaaactccacagatcacggagaaggggatcaaattcctcctgaag
gagcccaagaaaaagaaattaggaggactatttgggggcggagaaacaggcagggtagtt
cacatccgcgatccacaactatgcacttggattgtgggtaagattgaagaagctattaag
cgatctgcatag
DBGET
integrated database retrieval system
