Limulus polyphemus (Atlantic horseshoe crab): 106457715
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Entry
106457715 CDS
T08968
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106457715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lpol03041
]
106457715
Spliceosome [BR:
lpol03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
106457715
Complex C
U5 SnRNP specific factors
106457715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
106457715
NCBI-ProteinID:
XP_013772616
UniProt:
A0ABM1B129
LinkDB
All DBs
Position
Unknown
AA seq
2375 aa
AA seq
DB search
MALPPYMLGQPYMMGMLAQQQAAAAAQLAVQAQAQAQAQAQAQAQAHAQAQVHMQQQQQK
HTEFFVSEEKLQEKARKWQQLQSKRYAEKRKFGFVDAQKEDMPPEHIRKIIRDHGDMTSR
KYRHDKRVYLGALKYMPHAVLKLMENMPMPWEQIRDVRVLYHITGAITFVNEIPWVIEPV
YIAQWGAMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVEPLEAIQMELDSEE
DASVNKWFYDHKPLLDTKHVNGTTYRHWNLTLPQMATLYRLANQLLTDLVDHNYFYLFDL
KSFFTAKALNMAIPGGPKFEPLIKDSNTADEDWNEFNDINKIIIRQPVRTEYRIAFPYLY
NNLPHYVHLSWYHAPNVVYIKTEDPDLPAFYFDPLINPISHRHAVKGTEPLPDDDEEFEL
PENVQPFLQDSPLYTDNTANGIALLWAPRPFSLRSGRTRRAIDVPLVKSWYREHCPPAMP
VKVRVSYQKLLKYFVLNALKHRPPKPQKKRYLFRSFKSTKFFQTTTIDWVEAGLQVCRQG
YNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDS
HVQYRLNNVDAFQLSDGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGP
VGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESH
FDLELRASVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPIPIENMIL
RYVKMKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPY
ISAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQ
REELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLEKITDA
YLDQYLWYEADKRRLFPPWIKPADSEPPPLLVYKWCQGINNLQDVWDTSEGECNVMLESK
FEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFI
VQYYGLVLDLLVLGLQRASEMAGPPQMPNDFLTYQDVATESSHPIRLYSRYIERLHLFFR
FSAEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNR
LPRSVTTIQWENSFVSVYSKDNPNLLFNMSGFECRILPKIRMTHEEFTHKDGVWNLQNEV
TKERTAQCFLRVDEESMQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVN
TQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDL
RWSKQTDVGITHFRSGMSHDEDQVIPNLYRYIQPWESEFIDSQRVWAEYALKRQEALAQN
RRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRH
DGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTN
AQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAH
LWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAYKWNVS
RPSLLADSKDTMDGTTTQKYWIDVQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTG
LLIAIDLAYNLHSAYGNWYPGCKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTE
PYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLK
IIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFP
NIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILIL
RALHVNNERTKVILKPDKTTITESHHIWPSLSDEEWIKVEVQLKDLILADYGKKNNVNVA
SLTQSEVRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTS
NYETQTFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFIIISDL
RTQIAGYLYGVSPSDNPQVKEIRCIVMPPQWGTHQTVHLPSVLPQHEYLKEMEPLGWIHT
QPNELPQLSPQDITTHAKVMADNPQWDGERTIVITCSFTPGSCSLTAYKLTPSGYEWGRQ
NTDRGNNPKGYLPSHYEKMQILLSDRFLGFFMVPNQDSWNYNFMGVRHDPAMKYDLQLSN
PKEFYHEIHRPAHFLNFSNIEEGENIGADREDLFG
NT seq
7128 nt
NT seq
+upstream
nt +downstream
nt
atggctcttccaccatacatgttaggacagccatatatgatgggtatgttagcccaacag
caagctgctgcagctgctcagcttgctgtccaggctcaagcgcaggcccaggcacaagct
caggctcaggcacaagcacatgcccaagcacaagttcacatgcagcagcaacagcagaaa
catacagaattttttgtgtctgaagagaaactccaggaaaaagcaagaaaatggcaacag
ttgcaatctaaaaggtatgcagagaaacgcaagtttggttttgtggatgcccagaaagaa
gatatgcctcctgagcatataagaaaaattataagagaccatggtgatatgacaagcagg
aaatatcgccatgataaaagagtctatttaggagcattgaaatacatgcctcatgctgtt
ttgaagttaatggagaatatgcccatgccttgggaacagatcagggatgttagagtattg
taccacataactggtgcaataacctttgtgaatgagattccatgggtgatagaacctgta
tatattgctcagtggggagctatgtggataatgatgagacgtgaaaagagagacaggaga
cacttcaaaagaatgaggttccccccattcgatgatgaagaaccacccttggattatgca
gataatgtactggatgtagaacctctggaggcaatacaaatggagttagattctgaagaa
gatgcttctgttaataagtggttttatgatcacaaaccactcttagataccaagcatgta
aatggaacaacatatcgacattggaatctgactcttcctcagatggccacactgtatcgt
ttagccaaccaattactgacagatcttgtggatcataactacttttatttgtttgatttg
aaatcctttttcactgctaaagcacttaacatggctattccaggtggtccaaaatttgag
cctctcattaaagattccaacacagcggatgaagactggaatgagtttaatgacataaat
aaaatcatcatccgccaacctgtacgaacagagtacagaatagcttttccgtacctgtac
aacaacctaccacattacgttcacttatcatggtatcatgctccaaatgttgtgtacatt
aaaacagaagatcctgatctaccagcattttactttgatcctctaataaacccaatctcg
catcggcatgcagtgaagggtactgaaccactaccagatgatgatgaagagtttgagctt
cctgaaaatgttcaaccttttctacaagattcaccactctatacagacaacacagctaat
ggtattgctttgctctgggcccctagaccattcagtttacgttcaggcagaacaagaaga
gcaattgatgtaccacttgtcaaatcttggtatagagaacactgccctccagcaatgcct
gtgaaagtacgtgtttcataccagaagcttctcaagtattttgtgcttaatgccttaaaa
cacagacctccaaagcctcagaaaaagaggtatttgttccgttccttcaagtccactaag
tttttccaaactactacaattgactgggttgaggcagggttgcaagtgtgtcgtcaaggt
tacaatatgctgaatttattgattcatcgtaagaatcttaactatcttcacctggactac
aatttcaacttaaaacctgtgaaaacactgaccacaaaggaaagaaagaagtccaggttt
ggaaatgcttttcatctgtgtcgtgaaatcctgagactgaccaagttggttgtagacagt
catgtccagtaccggttaaacaatgtagatgcttttcaactttctgatggcctgcagtac
atctttgctcatgttggtcagttgactggcatgtaccgatacaaatataaattaatgagg
cagattagaatgtgtaaagatctgaagcacttgatctactacaggtttaacacaggtcca
gtaggtaaaggtcctggttgtggattttgggcaccagggtggcgtgtctggctgtttttc
atgagaggtatcacccctctgctagaacgctggcttgggaatctgctgtctcgacagttt
gaaggtagacattcaaaaggagttgcaaaaactgttactaaacagagagtggaaagtcat
tttgatttggaacttcgggcatctgtgatgcatgacattcttgacatgatgccagaagga
atcaaacaaaacaaagccagaaccatccttcagcacctgagtgaagcctggaggtgttgg
aaagctaacattccatggaaggtacctggtctgcctataccaattgaaaacatgattctg
aggtatgtgaaaatgaaagcagattggtggactaatactgctcattacaaccgagaaaga
attcgacgtggagccactgttgacaaaacagtgtgcaagaaaaatttggggcgcttaaca
cgactgtacttgaaggctgagcaagaaagacaacacaattacttgaaggatggcccttac
atcagtgctgaggaagcagtagccatctataccaccactgttcactggctagagagtagg
cggttttcaccaatccctttcccaccactttcctataaacatgacacaaagcttctgatc
cttgcattggaaagacttaaagaagcatatagcgttaagagtcggctgaaccaatcacag
agggaagagttgggactcattgagcaggcctatgataatccacacgaagccctgtcacgt
atcaaacgtcacttgcttactcagagagctttcaaagaggtagggatagagttcatggac
ctatacagtcacttgattcctgtatatgatgtggaacccctagagaaaatcacagatgct
tatctagaccaatatctctggtatgaggctgacaaacgaagactttttcccccatggatc
aagcctgctgattctgaaccaccaccacttttggtgtacaaatggtgtcaaggcataaat
aacttgcaagatgtatgggatacttcagaaggggagtgcaatgtaatgttggagtccaag
tttgaaaaaatgtatgaaaagattgatttaacgctacttaacagacttctgcgtctgatt
gtagaccacaatattgctgactacatgacagctaagaacaatgtggtcatcaactacaag
gatatgaaccataccaactcctatggtatcattcgagggctacagtttgcctcctttatt
gtccagtattatggattagtgctcgatcttttagtcttaggcttgcagagagcaagtgaa
atggctggtcctcctcaaatgcccaatgacttcttaacctaccaggatgtggcaactgaa
tcatctcatcctatcaggctttattcacgttacattgaaaggctacatttatttttcaga
ttctcagcagaagaagctcgagacttgattcaaaggtatctgacagaacatccagatcca
aacaatgagaatattgtaggctacaataacaaaaaatgttggccaagagatgctagaatg
aggttgatgaaacacgatgtaaaccttggacgtgctgtgttctgggacataaagaatcgg
ctaccacgatcagtaaccacaatacaatgggagaacagttttgtatcggtgtatagcaag
gataacccaaatcttctcttcaacatgagtggatttgaatgtcgaattttacctaaaatc
cgcatgacgcacgaagaattcactcataaagatggagtttggaatctgcagaatgaagtg
accaaagaaagaacagctcaatgtttcttgcgtgttgatgaagaatctatgcagaggttt
cacaacagggttcgacagatattaatggcatcaggctctaccacattcactaagattgta
aacaagtggaacacagctctgattggtctgatgacgtacttccgtgaagctgtggtaaac
acacaagaactattagacctactggtgaagtgtgaaaacaagattcagacaagaatcaag
attggacttaattccaaaatgccaagcagatttcctcctgttgttttttacactcccaaa
gagttgggtggcctgggcatgttatctatgggtcatgtacttattccacaatctgactta
agatggtcaaagcaaacagatgttggtatcacccactttcgatcaggcatgagccatgat
gaagatcaagttattcctaacttgtatcgctatatccagccctgggagagtgagtttatt
gactctcagcgtgtatgggctgaatatgctctgaaaagacaagaagcacttgcccaaaac
aggcgattgactctggaagatttggaagacagttgggatagaggtattccaaggattaat
actttgttccagaaggacaggcacacactagcctatgacaagggatggagagttcgaaca
gatttcaaacaataccaggtgttgaaacaaaatcctttctggtggacacaccagcgtcat
gatggaaaattatggaacttaaataactaccgtacagacatgatccaagctcttggggga
gtagaaggaatattggagcacacacttttcaaaggcacatacttccccacatgggaaggt
ctcttctgggaaaaggccagtggctttgaagaaagtatgaagtacaagaagttgactaat
gctcaaagatcaggtcttaaccagatcccaaaccgtcgcttcactttgtggtggtctcct
acaatcaacagggccaatgtatatgttggtttccaagtacagctggacctgacaggtatc
ttcatgcatggtaaaattccaactttgaagatctctttgatccaaatcttccgagctcac
ttgtggcagaaaatccatgagagtattgtcatggatctttgtcaggtgtttgatcaagaa
ttggatgcactagaaatagaaactgttcaaaaagaaaccattcatccaaggaagtcttac
aaaatgaacagttcttgtgccgacattttgttgtttgctgcttacaaatggaatgtgtca
aggccatcccttttggctgactctaaagacaccatggatggtaccacaacacagaagtat
tggatagatgtgcagcttcgatggggtgactatgactctcatgacatagaacgttatgcc
agagccaagtttttggattacacaactgacaacatgagtatctatccatcaccaactggc
ttattaattgctattgacttggcttacaatctccacagtgcatatggcaactggtaccct
ggatgcaaacctctcattcaacaagccatggctaaaatcatgaaagctaatcctgctctc
tatgtgctacgagaaagaattcgaaaggggttgcagctgtactcctctgagccaactgaa
ccatatctgtcttctcagaattatggagaactgttttctaatcagatcatttggtttgtg
gatgacactaacgtatatcgtgtaaccattcataagactttcgaaggtaacttgaccact
aagcccatcaatggagccatcttcatcttcaaccccagaactggacagttattcttgaag
atcattcacacatcggtttgggctggacaaaaacgtctgggtcagcttgctaagtggaag
actgcagaagaagtggctgctctcattagatccctaccagtagaagaacagcccaaacag
attattgtaaccagaaaaggaatgttagatcctttggaagtacatctgttggactttcca
aacattgtaatcaagggaagtgaattgcagctcccattccaagcgtgtctaaaggttgaa
aaatttggtgatttgattcttaaagccacagagccccagatggttttgttcaacttgtat
gatgattggctgaagactatttcatcatacacggccttctctcgactgatcctgatctta
cgtgctttgcatgtgaacaatgaaagaaccaaggttatcttgaagcctgataaaaccact
atcactgaatctcatcatatttggccgtcgctgtctgatgaggagtggatcaaagtggaa
gtacaactgaaggacttgattcttgctgactatggcaagaagaacaatgtaaatgtagct
tccctgacacaatctgaagtcagagatatcatcctgggtatggaaatttcagctccatca
gcacagcgacaacagattgctgagattgagaagcagactaaagagcagtctcaactcaca
gccactaccacacgtacagtcaacaaacatggtgacgagatcattacttcaacaaccagc
aattatgagactcaaaccttcagctctaaaacagagtggcgagtacgagctatttctgca
acaaacctccaccttcgtaccaatcatatttatgtttcatcagacgatatcaaggagacc
ggatatacctacattctacccaaaaatgttcttaaaaagttcatcatcatttcggatctt
cgtactcagattgcaggctacctgtatggtgtcagtccttcagataaccctcaagtaaaa
gaaataagatgcattgtgatgccaccccagtggggcacccaccagacagttcaccttcca
agtgttcttccccagcatgagtacctgaaggagatggaacctctaggatggatccacact
cagcctaatgaacttccacagttgtctccccaggacattacaactcatgccaaagttatg
gctgacaatccccagtgggatggtgagagaactatagtcatcacctgcagcttcacgcct
ggttcctgctctttgacagcatacaagttaacacctagtggatatgaatggggaagacag
aataccgacaggggaaataatcctaagggttatctcccttcccattatgagaaaatgcaa
attttgctgtctgatcgtttcttgggctttttcatggtccctaaccaagactcttggaac
tacaacttcatgggtgtaagacatgacccagcaatgaagtatgacttgcaactgtctaac
cctaaggagttttaccacgagatccatcgacccgcccacttcttgaacttcagtaatatt
gaggaaggcgagaatataggggctgatagggaagatttgtttggttaa
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integrated database retrieval system
