Limulus polyphemus (Atlantic horseshoe crab): 106457956
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Entry
106457956 CDS
T08968
Name
(RefSeq) putative ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106457956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpol03019
]
106457956
03036 Chromosome and associated proteins [BR:
lpol03036
]
106457956
Enzymes [BR:
lpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106457956
Messenger RNA biogenesis [BR:
lpol03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106457956
mRNA degradation factors
5'-3' decay
Decapping complex
106457956
Chromosome and associated proteins [BR:
lpol03036
]
Eukaryotic type
Gene silencing
piRNA pathway
106457956
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
CMS1
Motif
Other DBs
NCBI-GeneID:
106457956
NCBI-ProteinID:
XP_013772854
LinkDB
All DBs
Position
Unknown
AA seq
314 aa
AA seq
DB search
MVPTRELALQTSQICIEVSKYIGARVMVTTGGTSLKDDIMRIYENVHIIIATPGRILDLM
EKNVTQMDRCNMLILDEADKLLSQDFKGMLDKVISYLPKERQILLYSATFPLTVEQFMRK
YLKGPYEINLMDELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRVELL
AKKITELGYSCYYIHAKMSQQHRNRVFHDFRAGLCRNLVCSDLFTRGIDIQAVNVVINFD
FPKMAETYLHRIGRSGRFGHLGIAINLITYDDRFALHRIEQELGTEIKPIPKVIDKSLYV
SEFQLEDDVENVSK
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggtccccactagagaattggctctccaaaccagtcagatttgcattgaagtgtcaaaa
tacattggagcacgagtgatggttacaactggtgggacaagtttgaaagatgacatcatg
agaatttatgaaaatgttcacataattattgccacaccaggaagaatactagatttgatg
gagaaaaatgtgactcagatggatagatgcaacatgctaatattggatgaggctgacaag
ttactatcccaagactttaagggtatgttggataaggtaattagctatttaccaaaggaa
cgccagattcttctttactcggcaacattccctttgacagttgaacagtttatgagaaag
tacttaaaggggccatatgaaattaatttaatggatgagctgaccttaaaaggtgtgacc
cagtattacgcttttgttcaggagagacagaaagttcattgtctcaacacgctgttctca
aagttgcaaatcaatcagtccatcattttctgcaattcaactcaacgagtggaactcctt
gctaaaaagataacagagcttggttactcttgttactacattcatgcaaagatgtctcaa
caacatcgtaatagagtcttccatgattttcgtgctggtctttgccgaaatttggtctgt
tcggacttgttcaccagaggtattgatatacaagcagtcaatgtggttatcaattttgac
tttcctaagatggcagaaacttatcttcatcgtattggtagatctggtcgatttggacac
ctgggaattgctatcaacttgattacttacgatgataggtttgctttacatcgtattgaa
caagaacttggaacagaaataaagccaatccctaaggtgattgacaaaagtctgtacgtg
tcggagtttcaacttgaagatgatgtagaaaatgtgagcaagtag
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