Limulus polyphemus (Atlantic horseshoe crab): 106458328
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Entry
106458328 CDS
T08968
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol04382
Cornified envelope formation
lpol04512
ECM-receptor interaction
lpol04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106458328
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106458328
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
106458328
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lpol04147
]
106458328
00536 Glycosaminoglycan binding proteins [BR:
lpol00536
]
106458328
Exosome [BR:
lpol04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106458328
Glycosaminoglycan binding proteins [BR:
lpol00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106458328
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106458328
NCBI-ProteinID:
XP_013773291
LinkDB
All DBs
Position
Unknown
AA seq
1789 aa
AA seq
DB search
MELKSQRFSGLLLCKLSILIVFLIFLIPEIQAQYRDRESRILGGRSRGNRVLCGNCSAPG
CKCVGEKGSRGPPGPPGSIGERGLQGFPGMEGLPGEKGQKGESGSRGPRGPKGDRGKMGI
PGFPGINGIPGLSGMQGPRGPPGLDGCNGTDGAPGIPGTTGDIGPIGFPGDPGPKGTKGE
PAIGPAGLKGQKGEPGRDGTVGPPGSPGIDGFPGPPGTSGPPGLKGDRGDRGLVGMKGNM
GVGYTGMKGEPGLKGHPGPQGPPGVCPNTSEQIKPNETKIGPPGPQGERGMKGERGERGR
RGYDGIPGPQGKHGDIGMKGEKGLAGIPGPRGKDGFPGPPGPDGFKGDIGESGLPGLNGL
PGMKGEPGREGESGPRGLPGPPGPPGGSEGVAGPPGPPGPRGPKGPAGYPGTDGIPGEIG
LRGPPGIPGGVGLPGTPGREGLPGAKGEKGEPGLDGLAGLEGSSGIPGPPGAKGEPGPRG
IPGLSIPGPKGLDGTPGQSGFPGQKGERGDRGERGPAGDSLEGIPGSPGPQGPKGDKGFE
GFSGQPGFPGLPGPKGDSGGSCLNCIPGSKGEKGDRGLDGPPGLQGERGSPGPSGLDGQN
GDDGLPGSIGPPGKEGEAGIPGRDGAKGDKGEPAVVRPEVFLGPKGDKGDRGPSGPAGFP
GLDGQPGPPGQPGQPGVDGERGQKGSPGYPGPHGRPGPEGPVGAPGLKGEPGIGRPGLPG
EKGDSGEPGKSGRKGERGHKGEPGKLPAPENLIYLPGLRGQEGEPGIDGEKGDIGPRGRP
GLDGIPGLEGLPGKDGLPGAPGPRGLTGPRGEKGDQGPIGFPGDPGPLGQAGFPGAPGLD
GPKGDKGLPGIGPPGQPGIQGPLGPKGDRGYPGSPGPKGDQGLPGVPGAKGEPGPPGLNG
LDGLRGDKGEPAREGQPGLLGLVEPGQDGIKGERGYPGPPGPLGPPGPRGSRGDKGEPGL
PGFPGIDGEPGQAGLPGRDGLDGNPGQKGDKGNAGSVGFPGQPGNPGVDGQPGIPGPKGD
RGFDGAPGKEGPPGLNGEKGERGFPGLPGLKGSPGFASAKGEKGEPGIPGVEGPPGNPGL
PGLDGLPGEQGDAGIPGRGLPGPPGSKGDRGLEGPPGYPGQPGEKGADGLPGFNGMKGER
GQAGEPGPPGTSGLDGLDGAPGEPGSDGIPGLPGDKGEPGEQGISGFPGVKGDIGTAGRP
GLPGFEGLKGDKGEPGIPGLPGVEGEKGEKGEVGRPGLTGPPGVKGDRGLDGVPGLPGIK
GDRGQNGLDGRPGEDGKRGFTGPPGPIGKPGPPGVPGFGEKGEPGQSGRPGFDGIPGEPG
PKGDKGFPGREGIRGPSGEPGLPGVAGQKGDRGAPGLPGFPGQALPGPKGIDGLPGFPGN
KGERGYPGQPGPVGEKGEPGPPGQDGFSGLDGPKGDKGNAGLPGSPGFPGLKGERGYPGP
SGPSGRPGEKGEKGPKGDKGLQPPLNLYRGEKGDRGLPGERGQSGEKGDLGLRGPPGIKG
IKGEPGRRGPSGLPGLGGPVGLKGVDGFPGIPGPHGNPGVKGPPGLPGPPGPPGGDYLMG
ILLVRHSQSPNVPQCPRGMKSVWDGYSLLYIEGNEKAHHQDLGYAGSCLRRYSTMPFLFC
DFNSVCNYASRNDKSYWLSTTAPIPMMPVGEQAIRQYISRCVVCEAPANVIAVHSQSLSI
PDCPRDWSVLWIGYSFAMHTAAGAEGGGQSLSSPGSCLEDFRATPFIECNGARGTCHYFA
NKFSFWLTTIEPEAQFERPASETLKAGNLRSRVSRCAVCIKNTSFGSSP
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atggagttgaaatcacaacgattttctggacttttgctctgtaaattgtctatccttatt
gtcttcttaatcttcctgattccagaaatacaagcgcaatacagggatagggaatctagg
atacttggaggacgtagcagaggaaatcgagtactttgtggaaattgttcagcaccagga
tgtaaatgtgttggagagaaaggatcgcggggacctcctgggccacctggttctatagga
gaacgtggtttacaaggatttccaggaatggaaggtttaccaggtgaaaaggggcagaaa
ggtgaatcaggatctagaggaccaaggggtccaaaaggagataggggaaaaatgggaatc
cctggctttccaggaataaatggaattcctggtttgtctggtatgcaaggtcctaggggt
cctccaggtttggatggttgtaatggaacagatggtgctccaggtatacctgggacaact
ggagatattggacccataggatttcctggtgatcctggaccaaaaggaacaaaaggagag
cctgctattggaccagcaggtcttaaaggacagaagggtgaacctggtagagatgggaca
gtagggcctccgggttccccaggtattgatggctttccaggaccaccaggaacttcaggt
ccaccaggtttaaagggtgacagaggtgataggggtttagttggaatgaaaggaaacatg
ggtgtaggttacacagggatgaaaggagaaccaggacttaagggtcatcctggtccacaa
ggaccaccaggggtatgtcctaatacttcagaacaaattaagccaaatgagacaaaaatt
ggacctccaggacctcaaggagaaagaggaatgaagggggagagaggagaaagaggaaga
aggggttatgatggaattccaggacctcagggcaaacatggagacattggtatgaaggga
gaaaagggtttagctggaataccaggaccaagaggtaaagatggttttcctgggccacct
ggaccagatggttttaagggagatattggagagagtggacttcctgggttaaatggactt
cctggtatgaaaggtgaacctggaagagaaggagaatcaggtccaagaggcttacctggt
ccaccaggacctcctggaggatctgaaggagttgcaggaccacctggacctccaggacct
agaggtcctaaaggaccagctggttatccaggaacagatggtataccaggtgaaattgga
cttcgtggacctcctggaatccctggtggtgttgggttacctggaactccgggaagagag
ggtttaccaggtgccaagggtgaaaaaggagagcctggactcgatggccttgctggactt
gaaggttcatcagggatacctggaccaccaggagcaaaaggagaaccaggaccaagagga
atcccagggttatcaattccaggaccaaaaggtttggatggaactccaggacaatctggg
ttccctggacagaaaggagaaaggggggatagaggagaaagaggtccagctggtgattca
ctagaaggtataccaggttctcctggacctcaaggacctaaaggtgacaaaggttttgaa
ggtttttcaggtcagcctggttttccaggtctcccaggtcctaaaggtgatagtggagga
agttgtttgaattgtatccctggatctaaaggtgagaagggtgacagaggcttggatggg
cctcctgggctacagggtgaaagaggttcacctggaccttctggactagatggtcagaat
ggtgatgatggattacctggttcaattggacctcctggtaaagagggtgaagctggtatt
ccaggaagggatggagcgaaaggagacaagggagaacctgctgttgttcggcctgaagta
ttccttggaccaaaaggtgacaaaggtgatcggggtccatccggcccagcaggatttcca
ggattggatggtcaacctggacctcctggacaaccaggtcagccaggagttgatggggag
agaggccagaagggttctccaggctatcctggacctcatggaaggcctggtccagagggt
ccagttggtgcccctggtttgaaaggcgaacctggcattggaagaccaggactacctgga
gaaaaaggtgatagtggggaacctggaaaatctggacgtaagggtgaaagagggcataag
ggtgaaccagggaagttaccagcacctgaaaatctcatttacttgcctggacttcgtgga
caagaaggggagcctggaatagatggagaaaaaggtgatattggtccacgaggacgacct
ggattagatggtattcctggtttagaaggtttacctggaaaagatggactccctggagca
ccaggtcctagaggactaactggaccacgtggagagaaaggagaccaagggccaataggt
ttcccaggagatccagggccacttggtcaggctggattcccaggagcacctggtttagat
ggaccaaaaggagataaaggtcttcctggaattggaccacctggtcagcctggtatccaa
gggcctcttggtccaaaaggagatagaggttatcctggatctccaggtccaaaaggtgat
caagggttgccaggagttcctggtgccaaaggtgaacctggaccaccaggactaaatgga
cttgatggacttcgaggagataaaggagagccagccagagagggacagccaggtttactg
ggcctcgtggaacctggccaagatggaataaaaggtgaaagaggataccctggaccacca
ggaccacttggtccacctggaccaagaggatcaaggggagataaaggagaaccaggtctt
ccagggtttcctggtattgatggagaacctgggcaggctggattacctggaagagatgga
cttgatggaaatcctggacaaaaaggtgataagggaaatgcaggaagtgtgggattccct
ggtcaaccaggaaatccaggagtagatggccaacctggaattcctggacctaaaggagat
agaggatttgatggtgcacctggcaaagaaggtcctccaggattgaatggagagaaagga
gagagaggatttcctggacttcctggtcttaaaggatcaccaggttttgcatcagctaaa
ggagagaaaggtgaaccaggaatacctggcgtagaaggaccaccaggaaaccccggctta
ccaggtctagatggtctaccaggtgaacaaggtgatgcaggaatacctggaagaggactt
cctggaccacctgggtctaaaggtgacagaggtttagaaggtcctcctggctatcctgga
caacctggtgaaaagggtgctgatggattacctggatttaatggcatgaaaggagagaga
gggcaagctggagaaccaggacctcctggaacatctggcttagatgggttagatggagca
cctggtgaaccaggaagtgatggcataccaggactaccaggagataagggtgaacctggg
gaacaagggattagcggattcccaggagttaagggagacattggtacagcaggaagacca
ggcttacctgggtttgaaggtttgaaaggtgataaaggtgaaccaggcatacctggactg
ccaggtgttgaaggagaaaagggtgaaaagggagaggtaggacgacctggtttaacaggt
cctcctggagtaaagggtgacagaggacttgatggagttcctggattgccaggaataaag
ggggaccgtggacaaaatggattagatggcagaccaggagaggatgggaaacgaggattt
acagggccacctgggcctattggaaagcctggacctccaggagttcctggatttggagag
aaaggagaacctggccaatcaggtcgacctggttttgatggaatacctggtgaacctggt
ccaaagggtgacaaaggatttccaggccgagaaggaataagagggccttcaggagaacca
ggtctacctggagttgctggacaaaaaggtgatagaggggcaccaggtttacctgggttt
ccaggacaagcacttcctgggcctaagggtattgatgggctaccaggtttccctggaaac
aaaggtgaaagaggttatcctggacagcctggtccagttggagaaaaaggagaacctggt
cctccaggtcaagatggattttctgggcttgatggacctaagggagacaaaggaaatgct
ggtttacctggaagtccaggttttcctggtctcaagggtgaacgtggttatccaggccct
agtggtccttctggaagaccaggtgagaaaggtgaaaagggtccaaaaggagataaagga
ttacaaccacccctaaacttatatagaggagagaagggtgatagaggattgcctggagag
agaggacagtctggtgaaaagggagatttaggtctaagaggacctccaggaataaaaggt
attaaaggagaaccaggaagaagaggaccttcaggtttaccaggattgggaggtcctgta
ggattaaagggtgttgatggattcccaggtataccaggtccacatggtaatcctggtgtc
aaaggcccaccaggtctgcctggacccccaggccctccaggtggtgactatcttatgggt
atccttttggtaagacacagccaatctccaaatgtgcctcaatgtccacggggcatgaaa
agtgtctgggatggatatagcttactttacattgaaggcaatgagaaagctcatcatcaa
gacttaggttatgctggttcctgtctcagacgttacagcaccatgcctttcctcttttgt
gacttcaatagtgtttgtaactatgccagccgaaatgataaatcctattggctttccact
actgcacctattccaatgatgcctgttggagagcaagctatacgtcagtacatcagtcgc
tgtgttgtttgtgaggcacctgctaatgttattgctgttcacagtcaatcgctgagcatt
cctgattgcccaagagattggagtgtactttggattggttatagttttgcaatgcacaca
gcagctggtgcagaaggaggtggccaatctttgtccagccctggtagctgtttggaagat
ttcagagccacaccatttattgagtgtaatggtgctcgtggtacttgtcattactttgct
aacaaattcagtttttggttgacaaccattgaaccagaagctcaatttgaacgacctgcc
agtgagaccctcaaagctggtaatcttaggtctcgtgttagtaggtgtgctgtttgcatt
aaaaatacaagttttggttcttcaccatga
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integrated database retrieval system
