Limulus polyphemus (Atlantic horseshoe crab): 106458328
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Entry
106458328 CDS
T08968
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol04512
ECM-receptor interaction
lpol04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
106458328
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
106458328
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lpol04147
]
106458328
00536 Glycosaminoglycan binding proteins [BR:
lpol00536
]
106458328
Exosome [BR:
lpol04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
106458328
Glycosaminoglycan binding proteins [BR:
lpol00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
106458328
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
106458328
NCBI-ProteinID:
XP_013773291
LinkDB
All DBs
Position
Unknown
AA seq
1789 aa
AA seq
DB search
MELKSQRFSGLLLCKLSILIVFLIFLIPEIQAQYRDRESRILGGRSRGNRVLCGNCSAPG
CKCVGEKGSRGPPGPPGSIGERGLQGFPGMEGLPGEKGQKGESGSRGPRGPKGDRGKMGI
PGFPGINGIPGLSGMQGPRGPPGLDGCNGTDGAPGIPGTTGDIGPIGFPGDPGPKGTKGE
PAIGPAGLKGQKGEPGRDGTVGPPGSPGIDGFPGPPGTSGPPGLKGDRGDRGLVGMKGNM
GVGYTGMKGEPGLKGHPGPQGPPGVCPNTSEQIKPNETKIGPPGPQGERGMKGERGERGR
RGYDGIPGPQGKHGDIGMKGEKGLAGIPGPRGKDGFPGPPGPDGFKGDIGESGLPGLNGL
PGMKGEPGREGESGPRGLPGPPGPPGGSEGVAGPPGPPGPRGPKGPAGYPGTDGIPGEIG
LRGPPGIPGGVGLPGTPGREGLPGAKGEKGEPGLDGLAGLEGSSGIPGPPGAKGEPGPRG
IPGLSIPGPKGLDGTPGQSGFPGQKGERGDRGERGPAGDSLEGIPGSPGPQGPKGDKGFE
GFSGQPGFPGLPGPKGDSGGSCLNCIPGSKGEKGDRGLDGPPGLQGERGSPGPSGLDGQN
GDDGLPGSIGPPGKEGEAGIPGRDGAKGDKGEPAVVRPEVFLGPKGDKGDRGPSGPAGFP
GLDGQPGPPGQPGQPGVDGERGQKGSPGYPGPHGRPGPEGPVGAPGLKGEPGIGRPGLPG
EKGDSGEPGKSGRKGERGHKGEPGKLPAPENLIYLPGLRGQEGEPGIDGEKGDIGPRGRP
GLDGIPGLEGLPGKDGLPGAPGPRGLTGPRGEKGDQGPIGFPGDPGPLGQAGFPGAPGLD
GPKGDKGLPGIGPPGQPGIQGPLGPKGDRGYPGSPGPKGDQGLPGVPGAKGEPGPPGLNG
LDGLRGDKGEPAREGQPGLLGLVEPGQDGIKGERGYPGPPGPLGPPGPRGSRGDKGEPGL
PGFPGIDGEPGQAGLPGRDGLDGNPGQKGDKGNAGSVGFPGQPGNPGVDGQPGIPGPKGD
RGFDGAPGKEGPPGLNGEKGERGFPGLPGLKGSPGFASAKGEKGEPGIPGVEGPPGNPGL
PGLDGLPGEQGDAGIPGRGLPGPPGSKGDRGLEGPPGYPGQPGEKGADGLPGFNGMKGER
GQAGEPGPPGTSGLDGLDGAPGEPGSDGIPGLPGDKGEPGEQGISGFPGVKGDIGTAGRP
GLPGFEGLKGDKGEPGIPGLPGVEGEKGEKGEVGRPGLTGPPGVKGDRGLDGVPGLPGIK
GDRGQNGLDGRPGEDGKRGFTGPPGPIGKPGPPGVPGFGEKGEPGQSGRPGFDGIPGEPG
PKGDKGFPGREGIRGPSGEPGLPGVAGQKGDRGAPGLPGFPGQALPGPKGIDGLPGFPGN
KGERGYPGQPGPVGEKGEPGPPGQDGFSGLDGPKGDKGNAGLPGSPGFPGLKGERGYPGP
SGPSGRPGEKGEKGPKGDKGLQPPLNLYRGEKGDRGLPGERGQSGEKGDLGLRGPPGIKG
IKGEPGRRGPSGLPGLGGPVGLKGVDGFPGIPGPHGNPGVKGPPGLPGPPGPPGGDYLMG
ILLVRHSQSPNVPQCPRGMKSVWDGYSLLYIEGNEKAHHQDLGYAGSCLRRYSTMPFLFC
DFNSVCNYASRNDKSYWLSTTAPIPMMPVGEQAIRQYISRCVVCEAPANVIAVHSQSLSI
PDCPRDWSVLWIGYSFAMHTAAGAEGGGQSLSSPGSCLEDFRATPFIECNGARGTCHYFA
NKFSFWLTTIEPEAQFERPASETLKAGNLRSRVSRCAVCIKNTSFGSSP
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atggagttgaaatcacaacgattttctggacttttgctctgtaaattgtctatccttatt
gtcttcttaatcttcctgattccagaaatacaagcgcaatacagggatagggaatctagg
atacttggaggacgtagcagaggaaatcgagtactttgtggaaattgttcagcaccagga
tgtaaatgtgttggagagaaaggatcgcggggacctcctgggccacctggttctatagga
gaacgtggtttacaaggatttccaggaatggaaggtttaccaggtgaaaaggggcagaaa
ggtgaatcaggatctagaggaccaaggggtccaaaaggagataggggaaaaatgggaatc
cctggctttccaggaataaatggaattcctggtttgtctggtatgcaaggtcctaggggt
cctccaggtttggatggttgtaatggaacagatggtgctccaggtatacctgggacaact
ggagatattggacccataggatttcctggtgatcctggaccaaaaggaacaaaaggagag
cctgctattggaccagcaggtcttaaaggacagaagggtgaacctggtagagatgggaca
gtagggcctccgggttccccaggtattgatggctttccaggaccaccaggaacttcaggt
ccaccaggtttaaagggtgacagaggtgataggggtttagttggaatgaaaggaaacatg
ggtgtaggttacacagggatgaaaggagaaccaggacttaagggtcatcctggtccacaa
ggaccaccaggggtatgtcctaatacttcagaacaaattaagccaaatgagacaaaaatt
ggacctccaggacctcaaggagaaagaggaatgaagggggagagaggagaaagaggaaga
aggggttatgatggaattccaggacctcagggcaaacatggagacattggtatgaaggga
gaaaagggtttagctggaataccaggaccaagaggtaaagatggttttcctgggccacct
ggaccagatggttttaagggagatattggagagagtggacttcctgggttaaatggactt
cctggtatgaaaggtgaacctggaagagaaggagaatcaggtccaagaggcttacctggt
ccaccaggacctcctggaggatctgaaggagttgcaggaccacctggacctccaggacct
agaggtcctaaaggaccagctggttatccaggaacagatggtataccaggtgaaattgga
cttcgtggacctcctggaatccctggtggtgttgggttacctggaactccgggaagagag
ggtttaccaggtgccaagggtgaaaaaggagagcctggactcgatggccttgctggactt
gaaggttcatcagggatacctggaccaccaggagcaaaaggagaaccaggaccaagagga
atcccagggttatcaattccaggaccaaaaggtttggatggaactccaggacaatctggg
ttccctggacagaaaggagaaaggggggatagaggagaaagaggtccagctggtgattca
ctagaaggtataccaggttctcctggacctcaaggacctaaaggtgacaaaggttttgaa
ggtttttcaggtcagcctggttttccaggtctcccaggtcctaaaggtgatagtggagga
agttgtttgaattgtatccctggatctaaaggtgagaagggtgacagaggcttggatggg
cctcctgggctacagggtgaaagaggttcacctggaccttctggactagatggtcagaat
ggtgatgatggattacctggttcaattggacctcctggtaaagagggtgaagctggtatt
ccaggaagggatggagcgaaaggagacaagggagaacctgctgttgttcggcctgaagta
ttccttggaccaaaaggtgacaaaggtgatcggggtccatccggcccagcaggatttcca
ggattggatggtcaacctggacctcctggacaaccaggtcagccaggagttgatggggag
agaggccagaagggttctccaggctatcctggacctcatggaaggcctggtccagagggt
ccagttggtgcccctggtttgaaaggcgaacctggcattggaagaccaggactacctgga
gaaaaaggtgatagtggggaacctggaaaatctggacgtaagggtgaaagagggcataag
ggtgaaccagggaagttaccagcacctgaaaatctcatttacttgcctggacttcgtgga
caagaaggggagcctggaatagatggagaaaaaggtgatattggtccacgaggacgacct
ggattagatggtattcctggtttagaaggtttacctggaaaagatggactccctggagca
ccaggtcctagaggactaactggaccacgtggagagaaaggagaccaagggccaataggt
ttcccaggagatccagggccacttggtcaggctggattcccaggagcacctggtttagat
ggaccaaaaggagataaaggtcttcctggaattggaccacctggtcagcctggtatccaa
gggcctcttggtccaaaaggagatagaggttatcctggatctccaggtccaaaaggtgat
caagggttgccaggagttcctggtgccaaaggtgaacctggaccaccaggactaaatgga
cttgatggacttcgaggagataaaggagagccagccagagagggacagccaggtttactg
ggcctcgtggaacctggccaagatggaataaaaggtgaaagaggataccctggaccacca
ggaccacttggtccacctggaccaagaggatcaaggggagataaaggagaaccaggtctt
ccagggtttcctggtattgatggagaacctgggcaggctggattacctggaagagatgga
cttgatggaaatcctggacaaaaaggtgataagggaaatgcaggaagtgtgggattccct
ggtcaaccaggaaatccaggagtagatggccaacctggaattcctggacctaaaggagat
agaggatttgatggtgcacctggcaaagaaggtcctccaggattgaatggagagaaagga
gagagaggatttcctggacttcctggtcttaaaggatcaccaggttttgcatcagctaaa
ggagagaaaggtgaaccaggaatacctggcgtagaaggaccaccaggaaaccccggctta
ccaggtctagatggtctaccaggtgaacaaggtgatgcaggaatacctggaagaggactt
cctggaccacctgggtctaaaggtgacagaggtttagaaggtcctcctggctatcctgga
caacctggtgaaaagggtgctgatggattacctggatttaatggcatgaaaggagagaga
gggcaagctggagaaccaggacctcctggaacatctggcttagatgggttagatggagca
cctggtgaaccaggaagtgatggcataccaggactaccaggagataagggtgaacctggg
gaacaagggattagcggattcccaggagttaagggagacattggtacagcaggaagacca
ggcttacctgggtttgaaggtttgaaaggtgataaaggtgaaccaggcatacctggactg
ccaggtgttgaaggagaaaagggtgaaaagggagaggtaggacgacctggtttaacaggt
cctcctggagtaaagggtgacagaggacttgatggagttcctggattgccaggaataaag
ggggaccgtggacaaaatggattagatggcagaccaggagaggatgggaaacgaggattt
acagggccacctgggcctattggaaagcctggacctccaggagttcctggatttggagag
aaaggagaacctggccaatcaggtcgacctggttttgatggaatacctggtgaacctggt
ccaaagggtgacaaaggatttccaggccgagaaggaataagagggccttcaggagaacca
ggtctacctggagttgctggacaaaaaggtgatagaggggcaccaggtttacctgggttt
ccaggacaagcacttcctgggcctaagggtattgatgggctaccaggtttccctggaaac
aaaggtgaaagaggttatcctggacagcctggtccagttggagaaaaaggagaacctggt
cctccaggtcaagatggattttctgggcttgatggacctaagggagacaaaggaaatgct
ggtttacctggaagtccaggttttcctggtctcaagggtgaacgtggttatccaggccct
agtggtccttctggaagaccaggtgagaaaggtgaaaagggtccaaaaggagataaagga
ttacaaccacccctaaacttatatagaggagagaagggtgatagaggattgcctggagag
agaggacagtctggtgaaaagggagatttaggtctaagaggacctccaggaataaaaggt
attaaaggagaaccaggaagaagaggaccttcaggtttaccaggattgggaggtcctgta
ggattaaagggtgttgatggattcccaggtataccaggtccacatggtaatcctggtgtc
aaaggcccaccaggtctgcctggacccccaggccctccaggtggtgactatcttatgggt
atccttttggtaagacacagccaatctccaaatgtgcctcaatgtccacggggcatgaaa
agtgtctgggatggatatagcttactttacattgaaggcaatgagaaagctcatcatcaa
gacttaggttatgctggttcctgtctcagacgttacagcaccatgcctttcctcttttgt
gacttcaatagtgtttgtaactatgccagccgaaatgataaatcctattggctttccact
actgcacctattccaatgatgcctgttggagagcaagctatacgtcagtacatcagtcgc
tgtgttgtttgtgaggcacctgctaatgttattgctgttcacagtcaatcgctgagcatt
cctgattgcccaagagattggagtgtactttggattggttatagttttgcaatgcacaca
gcagctggtgcagaaggaggtggccaatctttgtccagccctggtagctgtttggaagat
ttcagagccacaccatttattgagtgtaatggtgctcgtggtacttgtcattactttgct
aacaaattcagtttttggttgacaaccattgaaccagaagctcaatttgaacgacctgcc
agtgagaccctcaaagctggtaatcttaggtctcgtgttagtaggtgtgctgtttgcatt
aaaaatacaagttttggttcttcaccatga
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integrated database retrieval system
