Limulus polyphemus (Atlantic horseshoe crab): 106458839
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Entry
106458839 CDS
T08968
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106458839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpol03019
]
106458839
Messenger RNA biogenesis [BR:
lpol03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106458839
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
106458839
NCBI-ProteinID:
XP_013773845
LinkDB
All DBs
Position
Unknown
AA seq
725 aa
AA seq
DB search
MSRHRNVRSMNYDEEYEGYYDVYGHSVEDDYCVSPSTEAEFLFDRTAQKHSISAYFSSPT
EETLPEEEEEEDGSFSSSQMNVSTSHLNLSQAKQEQLNSCVEEMQSVVGETVSESTLRTA
AMEHNFNVEKALDAVLNTNGFSTSSTQPKPQRNWRECRYRQGVHLKKNLVSEKPEYVDVE
NSVSELAFETCEEPTAVGSEGGMSRSRIEENDTKKEKDNARLKLEQSGKKGVSPTRDCSV
TPSKKSSSPEANSSQLVEKSRPIENCGIVVEAITPKPYGKSKAVERDSEAEYMKERGQNK
PLINLVVIGHVDAGKSTLMGHLLYKLGHVAKKAMHKFEQDSKKLGKASFVYAWVLDETEE
ERNRGITMDVAQSKFETPARFVTLLDAPGHKDFIPNMISGASQADVAILVVDATRGEFET
GFETGGQTREHTLLIRSLGVSQLAVAINKLDNVNWSQDRYNFIETKLGGFLKQAGFRETD
VTYVPCSGLTGENLTEPAKQDKLAAWYKGPCLVEVIDLFKPPQRSVSKPLRICINDIFKG
ISSGFCVAGKIESGHLKNGDKVLVTPAGELAVIKGVTVDDFPVTQGFAGDHVVVTVSGID
INNVTVGSVLCDPNQPARAASRFQARVVIFNIKIPVTKGFPVILHYQNLVEQAVIRKLIS
QLHRNTGQVIKNKPRCLTQNSSGVVEIEVNRPICVELYKDFRELGRFMLRSGGSTIAAGL
VTEIL
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtcatcgtaacgttcgttctatgaattatgatgaagaatatgaaggctactat
gatgtgtatggacattcagttgaagatgactattgtgtttctcccagcacagaagcagaa
ttcctgtttgaccgaactgctcagaagcattcgatatctgcatatttttcatctccaact
gaagaaacattacctgaagaggaggaagaagaagatggtagttttagcagctcgcagatg
aatgtttctactagccatttaaacttgagtcaagctaaacaagaacaactaaacagttgt
gtggaggaaatgcagagtgttgtaggagagacagtttctgagtcgacattgagaactgct
gctatggaacataactttaatgttgagaaggctttggatgctgttcttaataccaatggt
ttttcaacatcttctacacaacctaaacctcaacggaattggcgtgaatgcagatacaga
caaggtgttcatctcaaaaaaaatttggtatcagaaaagccagagtatgttgatgtggaa
aattctgtcagtgaactcgcatttgaaacctgtgaagagccaacagctgttggttctgaa
ggaggtatgtctaggtccagaattgaagagaatgatacaaaaaaagaaaaggataatgct
agattaaaacttgaacagtcaggcaagaaaggtgtttcacctacaagagattgcagtgtc
actccatccaaaaagtcctcttcaccagaagcaaacagtagtcagttggttgaaaagagc
agacctattgagaattgtggaatagtggttgaagctattactcctaaaccttatggaaaa
tctaaagcagtagaaagagactctgaggctgaatatatgaaagaaagaggtcagaataag
cctttaattaacctggtagtgattggccatgtagatgctggaaaaagtacactaatggga
cacttattgtacaaattaggccatgttgctaagaaagccatgcacaaatttgaacaggat
tctaaaaaacttggtaaagcctccttcgtgtatgcttgggtgttagatgaaacagaagag
gaaagaaatcgtggcataacaatggatgttgcacagtcaaaatttgaaacaccagctcgt
tttgtcacgttgcttgatgcacctggtcacaaagacttcattcccaacatgatatcaggt
gcttctcaagctgatgttgcaatactcgtagtggatgccactaggggagaatttgagacg
ggttttgagactggaggacagactagagaacatactttgttaattcggtctttaggggtc
tcacagctagcagttgctatcaacaaattagataatgtgaattggtctcaggatcgatac
aattttattgaaactaaactaggaggatttctaaaacaagcaggatttagggaaacagat
gtgacatatgtcccgtgtagtggattaactggtgaaaacctaactgagccagccaagcaa
gataagttagcagcatggtataaaggaccttgtcttgtagaagtcattgacttgttcaag
cctccacagcgttctgtgtctaagccactacgtatctgtatcaatgatatcttcaagggc
attagctcaggtttttgtgtggctggaaaaatcgaatctggacatcttaagaatggagac
aaggttctggtcactccagcaggggaactagctgttattaaaggtgtcacggttgatgac
ttcccagtgactcagggttttgcaggagaccatgtggtggtaacagtgtcaggtattgac
atcaataatgtgactgttggtagtgttctctgtgatcctaaccaaccagccagagcagcc
agtaggtttcaagccagagtggtgatttttaacattaagattcctgtcaccaaaggcttt
cctgttatccttcactaccagaatcttgttgaacaggctgtaatacgtaagctcatctct
caactgcataggaatacaggacaagtcataaagaataaaccaagatgtttgacccagaat
agcagtggtgttgttgaaattgaagtaaatcgacccatatgtgtagagctttataaagac
ttcagggagcttggacggttcatgttgcgttctgggggatcaacaattgctgcaggccta
gtgacagagatcttgtaa
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