Limulus polyphemus (Atlantic horseshoe crab): 106459167
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Entry
106459167 CDS
T08968
Name
(RefSeq) endoribonuclease Dicer-like isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lpol03036
]
106459167
Chromosome and associated proteins [BR:
lpol03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106459167
microRNA pathway
RISC loading complex
106459167
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_platform
Dicer_dsRBD
Ribonucleas_3_3
Dicer_dimer
DEAD
ResIII
PAZ
Helicase_C
Dicer_PBD
dsrm
RM44_endonuclase
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
106459167
NCBI-ProteinID:
XP_013774216
LinkDB
All DBs
Position
Unknown
AA seq
1833 aa
AA seq
DB search
MCYLTCRDYLHALLNQKLKNVLRKSTMENKTTGGSVSKSHHHSGANNIHTKTFTPREYQV
ELLESALKRNTIACLGTGTGKTFIALMLIKELAHELRKPYEEDGKRTIFLVPTVPLVIQQ
KDRIKEYTDLAVGFFYGEMGVDFWSAKQWESQFQEYQVLVMTAEIFRIILHHGFIPLSKV
NLLIFDECHAAVKNHPYKEIMICFDTCPKENHPKVLGLTASILNGKCKPSKLEKHIQNLE
LNLRSTAETARDLISLSKYGTNPTENVVVCDSLEASQSSAVPNILNHTLSFLNCTDLTLR
EEYVDLPHPSTLPKKYLTDTVKIFYDLGLWCGQKAAEIFISELDQEIETIFSDDHRNFLI
MTRTALLTVVYLCKSILSSDCMDGSKKEIDVIDSVPVTCKLRKLLEILEAFKPSSKAGDH
ENNIITGMPESRLVTKEKSKLADESDYLCGIIFVKQRSTAFLINLWLTEVSKAYTEYSFI
KSDFVVGHGLGGTSKTTKEAFMSFRKQEETLKRFRNHDCNILIATSVIEEGMDVPKCNLV
VRFDPPPDYRSYVQSKGRARAPGSHYILMVSVDKKEELLNTVQDFFKIEKLLLRKCHDRE
MHDEKQIADHVINEFKAPYMPVKRDGAPRITLSSAIMLVNRYCVKLPTDSFTRLAPECII
EEVVEDFTGTCMQLKSRNLYRATITLPINSLLKEPIIGDIMLTKRLAKMAAALDVCKKLH
EIGELDDNFVPVGKEDKKFEELFEELEKEEVTHGLAKPGTTNRRQVYNKKTADALCNSYP
TPGATCILYRFKMKLMRPIPKELNTRSRIISDPEDTTQGFGLLTTKKIPSICSFPLFTRS
GELEVELEYVASNLKFSEEDLESLAIFHKYIFSDVLQLVRYPMIFKPNAENASFLIIPVN
KESENESFSVDWKIVEIINKEKGVLPCKLSDDKRKKYIFNVKDYTDAVVMPCYRNFDKPK
SYYVAEICHELTPLSPFPDVGYETFEEYYNKKYKIKINNLSQNLLDLDETPARLNFLIPR
YLDNKGKAHNTRSDKRKKSGYKNPKQKQLLVPELCVVHPFSASLWKKAVCLPSVLYRINS
LLLAEEFRLRVAQEIGVGSVDDEIKWPKLYFDWLLFKTPVTLENRIENHNIQGFEISLSP
KKLSFSKLENTDLGRHEMQDFNFENKDCTHLFPSMDDIMKSSSNRIQYGFPNTFDETEGN
SELYSDMEEGEISTGSLETESLSDVLEISMSQESERLEDINCFETNYSPESALYVSQNSS
ESLSDNWEMGDTESEEENQEYEQEDKLDIRNQETRELNLNINLLEESKNINFGELLPERV
NQSLKEEDIFRVHFDENSENYPEPSPNIILQAFTMANACDGMNLERLETIGDSFLKYAVT
TYLFCKYQNIHEGKLTFIRSKQISNLNLYRIGKRKGIGELMIASKFEPHDNWLSPCYTIS
QKQGKEFTDVEMFEEHSDNGSLEECHWKAEVNNKFNKTQTSENPTSFSPDTSDGKSYNLL
TQESISDKSIADGVEALIGAYLLSCGPRATLLFMSWLGLWVLPKDEDGTSFIPKYGMFEP
PKSPLLMHVPCKNEILLKLTNGFDNFEKKIGYSFKVKAYLLQAFTHASYHYNKITDCYQR
LEFLGDAVLDYLITRHLFEDQKKHSPGNLTDLRSALVSNAFFASLTVKYTFHKYFKYLSP
GLFSVIQKFVELKRDTAECGYYDKYYLEENECELTEEVEVPKALGDIFESVAGAIYLDSG
MSLDTVWRVYYPMMKPEIEYFSTKVPKPPVRELLELGPLTVVFQPPEKTSNQRIRVQVDV
AGIGSFVGVGRNKCIAKSIAAKLALRELKKIKV
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atgtgttatttgacgtgcagagattatttgcatgcactcttaaatcagaagcttaagaac
gtgttaagaaaaagtactatggagaacaaaacaactggtggttctgtttccaagtctcat
caccacagtggtgcaaacaacattcacactaaaactttcacaccaagagagtatcaggtg
gaacttcttgaatcagctcttaaaagaaacactattgcctgtttgggaacaggaacaggt
aaaacattcatagcattaatgttgattaaagaacttgctcatgaattgagaaaaccatat
gaagaggatgggaaaagaacaatttttttagtgcctacagtgcctcttgtgatacagcag
aaagataggataaaagagtatactgatcttgctgtcggatttttctatggtgagatgggt
gttgatttttggagtgccaaacagtgggaatcccagtttcaggaataccaagttttagta
atgactgcagagatttttagaattattttgcaccatggatttattcctctgtcaaaagtt
aatctattaatttttgatgaatgtcatgcagcagtgaagaatcacccttacaaagaaata
atgatttgttttgatacttgcccaaaagaaaatcatcctaaggttcttggattaactgca
tctattttgaatggcaagtgtaaacccagtaagttagaaaaacatatacaaaacctagaa
cttaatttgagaagtacagcagaaacagcaagggaccttatttctctaagtaaatatgga
acaaaccccacagaaaatgttgttgtttgtgattctcttgaagcatcacaaagcagtgca
gtgccaaatatactaaatcatactctttcatttctgaactgtactgatttaaccctaaga
gaagaatatgtggatttacctcatccatccactctgcctaaaaagtacttaactgacaca
gttaaaattttttatgaccttggtctttggtgtggacaaaaagctgcagaaatatttatt
agtgagttggatcaggaaattgaaacaatattttcagatgatcatcgtaattttttgatt
atgacaagaacagcactcctaacagttgtttatctgtgtaaaagtatattgtcttctgat
tgtatggatggtagtaaaaaggaaatagatgtgatagatagtgtaccagttacatgtaag
ttaagaaagctacttgaaatactggaagcttttaaacctagttcaaaggcaggtgatcat
gagaacaacataatcactggtatgccagagtctagattagtaacaaaagaaaaatcaaaa
ttagctgatgaatctgattacctctgtggaattatttttgttaaacagcgtagcactgca
tttttaatcaatttatggttaacagaagtcagcaaagcttatacagagtatagttttata
aaatctgactttgttgtaggccatggtttgggaggcacaagtaaaactactaaagaggct
tttatgtcttttcgaaaacaagaggagactttgaagaggttcagaaaccatgattgtaat
attctcattgctacatcagtaattgaagaagggatggatgtacctaagtgcaaccttgtt
gtgagatttgatccacctccagattatcgatcatatgtacagtccaaaggacgagcaaga
gcaccaggttctcattacatactcatggtttctgtagataaaaaagaggaattgctgaat
actgttcaggattttttcaaaattgaaaagctccttcttcgaaagtgccatgaccgagaa
atgcatgatgaaaaacagatagctgaccatgtgatcaatgagttcaaagcaccatacatg
cctgtaaagagggatggagcaccacgtattactttgtcttcagccatcatgcttgtcaac
agatattgtgtaaagttaccaactgattcatttactcgattggctccagagtgtataata
gaagaagtagttgaggattttactgggacttgtatgcaactgaaatcaagaaatctgtac
agagccacaattactcttccaattaattctctactgaaagaaccgatcataggagatata
atgctcaccaaacgtttagcaaagatggctgcagctttagatgtatgtaagaaactccat
gaaattggagaattagatgataattttgttcctgttggcaaagaggacaaaaaatttgaa
gaattatttgaagaattagaaaaggaagaagttactcatggcttagccaaacctggtaca
accaacagaagacaggtctacaacaaaaagacagcagatgccttgtgcaacagttatcct
actccaggagcaacttgcattctgtaccggttcaaaatgaagttgatgcgtccaatacca
aaagaactgaacactagaagtcgcattatttcagatcctgaagacaccacacaagggttt
gggctactgactacaaagaaaataccttctatatgcagttttccacttttcactcgttct
ggagaactagaagtagaactagagtatgtcgcatcaaacttgaaattttcagaagaagac
ctggaaagccttgctattttccacaaatatatattttctgatgttctacaactggttaga
taccctatgattttcaaacctaatgcagaaaatgcatcatttctcattattcctgtaaac
aaagaaagtgaaaatgaatctttcagtgtagattggaaaattgtggaaattattaataag
gaaaagggtgttttaccttgtaagttgtcagatgacaaaagaaaaaaatacatttttaac
gtgaaagactacacagatgcagttgtgatgccatgctacagaaattttgacaaacccaaa
tcttattatgtagctgaaatttgccatgaactaactcctctaagtcctttccctgatgtt
gggtatgaaacattcgaagaatattacaataagaagtacaaaatcaaaataaataatttg
tctcaaaatcttcttgatctggatgaaactcctgcaagacttaactttttaatacctcgt
taccttgataataaaggtaaggcacataacacaagaagtgataaaagaaaaaaatcagga
tataaaaatccaaaacagaagcagttactggtaccagagctttgtgttgttcatcctttt
tcagcttcattgtggaagaaggctgtttgcctaccttctgttttgtaccgtatcaattca
ttgttgcttgctgaggagttcaggctaagagtagctcaggagattggagtaggatcagta
gatgatgaaatcaagtggcctaagctttattttgattggctacttttcaagactccagtc
actcttgaaaacagaattgaaaatcataacatacaaggttttgaaatctccttgtctcct
aaaaagctttcattttccaaactagaaaacactgatttaggcaggcatgaaatgcaagac
tttaattttgaaaacaaagactgtactcatctttttccatctatggatgatataatgaag
agtagttccaacagaatacaatatggctttcctaacacttttgatgaaactgaaggtaat
tcagaattatatagtgacatggaagagggagaaataagtacaggtagcttggaaacagaa
tctttgagtgatgttttagaaattagtatgtcacaagaaagtgaaagactagaagatatt
aattgttttgaaacaaattattctccagaaagtgctttatatgtttcacagaatagttca
gaatctttgtcagataattgggaaatgggtgatactgaatctgaagaagagaatcaggaa
tatgaacaagaagataaactggatataagaaaccaagaaactagagaattaaatcttaat
ataaatcttcttgaagagtccaaaaatatcaattttggtgagttgctacctgaacgagta
aatcagtcacttaaagaggaagatatatttcgagttcactttgatgaaaactcagaaaat
tatccagaaccaagtcctaacattatcctacaagcttttaccatggccaatgcctgtgat
ggaatgaatttggagaggctggaaaccattggggattctttcttaaagtatgcagtaact
acttatttgttttgtaagtaccaaaatatccatgaaggaaaacttacattcattagaagc
aaacagatcagtaatctaaacttgtacagaattggaaaacgaaaaggcataggtgaatta
atgattgccagtaaatttgaaccacatgacaattggctttctccatgctataccatatca
cagaaacaaggaaaagaatttactgatgtagaaatgtttgaagagcattcagataatgga
agtttggaagaatgccattggaaagcagaagttaataataaatttaacaaaactcaaact
tctgaaaaccccacatccttttcaccagacacctcagatggaaaatcttataatctgctt
actcaagaaagcatttcagacaagagtattgcagatggagtagaagccttgataggggcc
tatctgttgtcatgtggaccacgtgcaacacttctttttatgtcttggcttggtctctgg
gttcttcccaaggatgaagatggtactagtttcattccaaagtatggaatgtttgagcct
ccaaaatcaccccttcttatgcatgttccttgtaaaaatgagatacttctgaagttaacg
aatggctttgataactttgagaaaaaaattggatattcttttaaagttaaggcttacctt
ctacaagcctttacccatgcatcttatcattacaataagattactgactgttaccagagg
ttggagttcttaggggatgctgttcttgattatcttatcacgcgacacttgtttgaagac
cagaaaaaacactcccctggaaatctgacagacttacgttctgctcttgtaagcaatgct
ttctttgcatcactaacagtgaagtatacctttcataagtatttcaaatatctttctcct
ggcctattttcagttatacagaagtttgtagaactgaaaagagatactgctgagtgtgga
tattatgataaatattatctggaggaaaatgaatgtgagttgactgaagaagtagaagta
ccaaaagcacttggagacatttttgagtccgttgctggagctatttatctagacagtgga
atgtctctagacacagtttggagggtatattaccctatgatgaaaccagaaattgaatat
ttcagtactaaagtacctaagccacccgtcagagaacttttggaattggggccccttaca
gttgtgtttcaacctcctgagaagacttcaaatcaaagaataagggttcaagtggatgtg
gctggaataggaagttttgttggtgtaggaagaaacaaatgtatagccaagagcatagca
gcgaagttagccctaagagaattgaaaaagatcaaagtgtaa
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integrated database retrieval system
