Limulus polyphemus (Atlantic horseshoe crab): 106459210
Help
Entry
106459210 CDS
T08968
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106459210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpol03019
]
106459210
Messenger RNA biogenesis [BR:
lpol03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106459210
mRNA degradation factors
5'-3' decay
Decapping complex
106459210
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
DUF3150
YpjP
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
106459210
NCBI-ProteinID:
XP_022241363
LinkDB
All DBs
Position
Unknown
AA seq
1310 aa
AA seq
DB search
MKVIKDKGQITRLFALEVGSRGMAGTSVYSLLKHLGMSSQRRSKYLKELAETAGKGRCYI
HTFQKCYCRNCISFIEYHVCETALRLKPYCNSTFTGDEGNFSFGIYNKDVTIYPSPSPHP
SGSSKIKIQNIVDYGWEYRYFWGKLVACHNSSKYLAYVIKAPNTVCGAVRVMNCVTGERE
LIKGMKGQVVDLCFAHSSPQVLLACVDETGCMFVYEILEENEKLQCKLMLQVDRTEEPKP
GDIHRVIWCPFIPDDPGVSEDIEESILEDSSKLLVLTHNEQAEMWHVDMVSREYGHGPIM
VDQVEIGYQAFQEHQKPIIDAAFSPEGTALATASLDGEVKFFQVYMQNKSTSPRCLHQWI
PHEGKPLSCLFFLDNHKDPKPDIQFWKFAITGAENNQELKVWSCETWECGETFFRFTLKK
TDNVQPSLRAELDRSSSHLLLSDINRNGLYVLQIHQDHAHNVVNICSVSEFFLTLPVLSL
SIKDAGFCKLKSVIGLEHVEHMGQDLEDNHEEDDLTETYVKGTVIRLFWINTKSLQDCRI
VYQSAVPVPQDNSESLSSLSHDSFVYRDGLSDISVDNQNGENDVCVEKKPVNSTATILAQ
TPVLSSSVVSLSTVTPITPGTVSSYSTNFQSSTEVLLTPDHFTSPSHTSGSPAVSSSSFT
PSSVPLPPVTPSEEVNLATCNNEDNSNLASQVHDTPLATSEKISIPRRKSSHRSSASTPS
QEVASILSSDRELEKQDDAEFAEDQHTEDLGEELGYQDNKSTYSMGESLICNGSTVSVNA
LSEFSHKAQFGSMEWPHAPDPTKDYRLASSGSGTEISQSTETTHTFPQDSSRYSLHRLEV
IVEGLSRKVSSMMDLMHAERSEIREIQSTLREQIQQHKVLHNQVQRLERLDSSICSRVEN
VLTKQAQSEFTKMQTLFTKREDSDRQWLERQASTLSQAVTLAVGNKLDKTIKNEIKNLVL
PNLTKFFDNVKDQIQQEVTQKLTAADNVVKDNIGKMMKNKSLMDNISQSLATSVHSQIQD
SCREVFQAYIIPSYERACQQLFHQLNDTFQHGIKEYLQQTESWIERQIQQNQNVTQISSA
HLDQQFSQIQSALEKHVSSSLLGSQDKISQKFQENLNRALDGLIGRVQTTTRDEVRLALQ
EHQASPDASVSSLRSRAITPVPHCDPQTQLQQILHLFRQGQVNAAFQQALCVSDVNIVLK
VCESVSTTQVFGPPCPLQQQVLLSLIHQLSQDFSTKTELRYNYISEALMNLDTSNPLTRE
HFGLVLSTLGQKLSTFIQHNPQHKQIRNLKMLRMAAHSLHSNNSQSFQPV
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaatcaaagacaaggggcaaattacaagactatttgctttagaagttggatca
agaggcatggcaggtacatcagtatacagcctactgaaacatcttgggatgtcaagtcag
agaaggtccaagtacttgaaagaactggcagaaacagcagggaaggggagatgttatata
catactttccaaaagtgttactgtcgaaattgcatcagtttcattgagtaccatgtctgt
gaaacagctttaagacttaaaccttattgcaacagtacttttacaggagatgagggaaac
ttcagttttggaatttacaataaggatgtcacaatttatccaagcccttcacctcatcct
tctggaagcagcaaaatcaagatacagaacattgttgattatggttgggaatatcgttat
ttttgggggaaactagttgcatgccataattcttccaagtatttggcatatgtcatcaaa
gctccaaacactgtttgtggtgcagtcagagttatgaattgtgtaacaggagagagagaa
ctaatcaaaggaatgaagggacaggttgtggacctctgctttgctcattcctcaccacag
gttttactggcatgtgttgatgagacaggatgtatgtttgtatacgagattctagaagaa
aatgaaaagctacaatgcaaattaatgctgcaggttgatcgtactgaagaaccaaaacct
ggtgacatccatcgggtgatttggtgccccttcattcctgatgatcctggtgttagtgaa
gatattgaagaaagcatcctagaggacagttccaaactcttggttcttacccacaatgaa
caagctgagatgtggcatgtggacatggtttcgagggaatatggtcatggtcctataatg
gtggatcaagtagaaattggctaccaggcatttcaggaacatcagaagcccattatagat
gcagcattttcaccggaaggtacagctttagctacagccagtttagacggtgaagtaaaa
tttttccaggtctacatgcaaaacaaatctacttctccaagatgtttgcaccagtggatt
cctcatgaaggaaaacccttgtcatgtctgttttttttggacaatcataaagatcctaaa
ccagatattcagttttggaagtttgctataactggagcagagaacaatcaagagctgaaa
gtgtggagctgtgaaacatgggagtgtggtgaaacatttttcagatttactctaaagaaa
actgataatgttcagccaagtttgcgagcagagctagaccgttcttcatcacatcttctc
ttgtcagacattaacagaaatggtctctatgtacttcagatccatcaggatcatgcacat
aatgttgtaaacatttgctcagtatcagagttttttctcactctaccagtgttaagctta
tctataaaagatgcaggattctgcaaactgaagtctgtaattggccttgaacacgtagaa
cacatgggacaagacttggaagataaccatgaagaagatgacttaactgagacttatgtg
aagggaactgtgatcagactcttctggattaatactaagtcccttcaagattgtcgcatt
gtctaccaatctgctgtacctgtacctcaggataactctgaatctctgagttccttgtct
catgattcttttgtatatcgtgatggtttgtcagacattagtgtagataaccagaatgga
gaaaatgatgtctgtgtagaaaagaaaccagtgaattcaacagccactatattggcacaa
actcctgtgttgtcttcctcagtagtatctctctccactgtaacaccgataactccagga
acagtttcttcttattctacaaattttcagtcttcaacggaagttcttcttactccagat
cactttacttctccatcacacacctctggttctcctgctgtctcttcttcttcattcact
ccctcatcagttccccttcccccagtcactccttcagaagaagtcaaccttgctacatgc
aacaatgaagataacagtaatttagcaagtcaagttcatgatacgcctttggcaacctct
gagaaaatctctattcctcgtcgaaagtcctcccatcgtagttcagctagcactcctagc
caagaagttgccagcattctttcatcagatagagaactagaaaagcaggatgatgcagag
tttgctgaagatcaacatacagaagatttgggagaggaacttggttaccaagacaataag
tctacctactccatgggagagagtctaatatgtaatggttctactgtatctgtcaatgct
ttatcagagttcagtcacaaggctcagtttggaagtatggagtggccccatgctccagac
cctaccaaagattatagacttgccagttctggatctggaacagagatatcacaatcaaca
gagactactcataccttcccacaagatagcagtagatacagcttgcatagactggaagtg
attgttgaaggattgtcacgtaaagtatcttctatgatggatctgatgcatgcagagaga
tctgagatacgggaaatccagtctacactgagagaacaaattcagcaacataaggtactc
cacaatcaagtccaacgtttggaacgtttggacagttccatatgttccagagttgaaaat
gtgttaacaaaacaggcacaatctgaatttacgaaaatgcaaaccctgtttactaagaga
gaagactcagaccgccagtggttagaaagacaagcctcgacactttctcaggcagtaact
ttagctgttggcaacaaattagataaaaccataaaaaatgaaataaaaaatttggttctg
ccaaatctgacaaagttttttgacaatgttaaggatcagattcaacaagaagtcactcag
aaactaacagcagcagataatgttgtaaaggataacataggaaagatgatgaagaataaa
agtctgatggataacatatctcagtctctggccactagtgtccattcccaaatccaggac
tcctgtagagaagttttccaggcttacatcattccatcatatgaaagagcttgtcagcaa
cttttccatcaacttaatgatacatttcaacatggaatcaaagagtacctacaacagact
gaaagctggattgaaagacagatacagcaaaatcaaaatgtaactcaaatcagctcggca
catctggatcaacaattttcccagatccagtcagctttggagaaacatgttagtagttca
ctacttggatcacaagataagatctctcagaagttccaggaaaatttaaacagagctcta
gatgggctaataggacgagtacaaacaaccactcgggatgaggtacgactggccttacag
gaacatcaggcatctcctgatgcatcagtttctagtcttcgttctcgtgccattactcca
gttcctcactgtgatcctcagacccagttacagcaaattcttcatctctttagacaaggt
caagtgaatgctgctttccagcaggcattgtgtgtatctgatgttaacattgtgctgaaa
gtgtgtgagagtgtctcaacaacacaggtgtttggtccaccctgtccacttcaacagcaa
gttcttctttccctcatccatcagttgtctcaagacttttccaccaaaactgaattaaga
tataactacatttctgaagctctgatgaacttggacactagtaaccccttgacaagggaa
cactttggacttgtgttgtctacccttgggcagaaattaagcaccttcatccagcacaat
ccacaacacaaacagattcgtaacttaaagatgttaaggatggcagctcatagcctacat
agcaataatagccaatctttccaacctgtttaa
DBGET
integrated database retrieval system
