Limulus polyphemus (Atlantic horseshoe crab): 106459930
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Entry
106459930 CDS
T08968
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106459930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lpol03021
]
106459930
03036 Chromosome and associated proteins [BR:
lpol03036
]
106459930
Transcription machinery [BR:
lpol03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
106459930
Coactivators
SAGA/TFTC/STAGA complex
106459930
Chromosome and associated proteins [BR:
lpol03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
106459930
STAGA complex
106459930
TFTC complex
106459930
SAGA complex
106459930
SLIK complex
106459930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
TFIID_NTD2
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
WDR55
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_Nup120_160
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_Vps41
Beta-prop_NWD2_C
WDR54
Tricorn_2nd
WD_LRWD1
eIF2A
Mala_s_1-like
Motif
Other DBs
NCBI-GeneID:
106459930
NCBI-ProteinID:
XP_013775052
UniProt:
A0ABM1B568
LinkDB
All DBs
Position
Unknown
AA seq
625 aa
AA seq
DB search
MRINSFSFEMKRSRSELVSSAVGSFLRRRQYSDSETFKKSDLNIHQVLQEMTLNATVCVG
TGMRNAFSYTSISGDATAVDQQYTRLKNFLSEALEPYKSELSYILFPMFIHLYLELVTNG
QKTAAQKFHSRHHGLFLHSQEYKSVAENLCSIVTLQDLTKFSTVKELRENKFHVQLSEDC
VEYFLKFLKDNDQLILLQVLNMYFCIEVVNLSDRDSNNLHIKEDSPPTKLSQTSSPACEI
KNEKSPKSLTNSKESLEALKQAIRKVSESPPCLPSVCLYTVNNTHQGLSSVSLSQDTTLL
AGGFENSSIRLWSLTPKSLESMKTDVDVSKIRLGYDVLPGDYEMENDVSSSHVKVMRGHG
GPVYSLAFVPRSNILLSASEDTTVRAWSMTNHTNVVIYRGHAYPVWSLDIGPLGFYFATA
SKDHTARIWTTDRTYPLRILAGHNLDVDCVKFHPNGNYVATGSSDRTVRLWSVQDGKMVR
MFHGHRGSIFALAFSPNGQYLASAGEDRRIKIWDLSSGLVMKELRGHTDTVYSVCFNNDS
TVLASGGLEHVLRIWDVRKGITHHGGHTATGSTASTNPRSDRIDSHTTPELLGAFPTKST
SVQLVQYNWHNLLLAIGEGVETPSS
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgagaataaatagtttttcgtttgaaatgaagcgaagtcggagtgaacttgtttcttca
gcagtgggcagctttctgagaagaagacaatattcggactcggaaacattcaaaaagagt
gacctgaacattcatcaagttcttcaggagatgactttgaatgccactgtctgtgttggt
acaggaatgagaaatgctttcagctacactagcatcagtggagatgccactgctgtggac
cagcagtacacaaggttgaagaactttttatctgaagctttagagccctacaagtctgaa
ctctcatacattctctttcctatgtttatccatctttacttggaattggtgactaatggt
cagaagactgcagctcaaaagtttcattccagacatcatggactttttcttcattcccaa
gagtacaaaagtgtagcagagaatctttgcagcattgttacccttcaagaccttacaaag
ttttctactgtaaaggaacttagggaaaataaattccatgtgcaactcagtgaagattgt
gtagaatatttcttgaaatttttaaaggataatgatcagcttatacttcttcaggtgtta
aacatgtacttttgtatcgaagtggttaatttatcagatcgagattctaataatctgcat
attaaagaagatagtccaccaacaaaactcagccaaacttcaagtcctgcttgtgagatt
aagaatgaaaaaagtcctaagtcacttactaatagtaaagaatctttggaagctttgaaa
caggccatcaggaaagtgtcagaaagccctccttgccttccttcagtgtgtttgtatact
gtgaacaatacacatcagggacttagtagtgtcagcttgtcccaggatactactcttttg
gctggtggctttgagaattcaagcattcgtctatggagtctgacacccaagtctttagaa
tcaatgaaaactgatgttgatgtgtctaagattcgtcttgggtacgatgttttgccagga
gattatgaaatggaaaatgatgtttcttcaagccatgtcaaagtgatgagaggtcatgga
gggcctgtatacagcctggcttttgttccaagaagtaatatattgttatctgcttcagaa
gatacaactgtccgagcatggagtatgacaaaccacaccaatgttgtaatttatagaggc
catgcttatcctgtctggtctctggatattgggccattaggattttattttgctacagca
tctaaagaccacactgcaagaatttggactacagacagaacatatcctctaaggatatta
gctggacataacctagatgttgattgtgtaaaatttcatccaaatggaaactatgttgcc
actggttccagtgatcgaactgttagactttggagtgttcaagatggaaagatggtcagg
atgttccatggtcatagaggcagtatttttgccctagcgttttctcccaatggacagtac
ctggcttctgcaggtgaagacaggaggataaaaatctgggatctttcttcaggattggtc
atgaaagagttacggggacatacagacactgtttacagtgtctgctttaataatgacagt
accgttttagcctcgggaggcttggaacatgtgctcaggatttgggatgtcagaaaagga
attacccaccatggaggacatactgctactggtagtactgctagcacaaatcccagatcc
gacagaatagatagtcacactaccccagaattgctaggagcctttccaaccaaatccact
tctgtgcagcttgtccagtacaactggcataacttattgctggccataggagaaggagta
gagacacctagttcctga
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