KEGG   Limulus polyphemus (Atlantic horseshoe crab): 106460556
Entry
106460556         CDS       T08968                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1-like
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
lpol  Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lpol00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106460556
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lpol03041]
    106460556
   04121 Ubiquitin system [BR:lpol04121]
    106460556
Spliceosome [BR:lpol03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    106460556
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    106460556
Ubiquitin system [BR:lpol04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    106460556
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 106460556
NCBI-ProteinID: XP_013775725
LinkDB
Position
Unknown
AA seq 828 aa
MGSKKHKEKDREKKKRKRSKSRSRSKSPKEKRHKSKHEKSSGSHRERDGKRKRHRKYDYE
SPPEEYVQDEQVRIKEELEEDVQVKNEASDVEEGEIEVQERVNRGVGSNISLSIEEANRL
RAKLGLKPLQVKEDKLVHEAGGGGGGGENSLSITETNKLRAKIGLKPLQLQEEIPGLEQA
DGGNDDDEEERKEVFVKTENISDKKKEETIREKLKIQKEKRKIADKLSKTKCLGESDSEN
EDVLLWVKKSRELQEEREKAEKRAKMLAEMDEEFGVGALVEEEFKGMKASGKAYTSKDLR
GLTVGHGVNVFKEGGSVVMTLRDRDVLDESEDVLENVNIVEEEKASKNVENKKKKPEYRP
YEEPEFDEFGIVKKKSVLSKYDEELEGPKKELFKIGSTSIGDREKELELIRLKLKQQQGT
TLDLPALKPASEYYTDEEMVRFRKSKKKVRKVRKRGVLKPDDLLPLPEENLTSHPGSKPV
DQEEGPVLEAEEDNNKQKDMEVDEAEVEDSEIVGPEEDLTGVFVEEDQAELELQSALNKA
RKLKQKESLNTGIEKIAEVVLKKEPKQEESSEKIGNIVLNSTAEFCRNLGDIPTYGMSGN
REDEADEIMDFERELMEEQQLKELEAQNRGAWNEVDIDDKPVEINDQESIPILEEEPDVG
TGMAAALQLAMKKGYLENEVKKPVSAQRHSDLQAQSYTIEEKFYDDDKASRRDRYVGPLS
DFKDKDGYKPDIKLEYIDDSGRLLDAKEAFRYLSHKFHGKGPGKNKVDKRAKKLEQEAKL
RQMSSTDTPLNTVNLMQEKQKELQSPYLILSGGNKALSLTQTTIIKPK
NT seq 2487 nt   +upstreamnt  +downstreamnt
atgggttctaagaaacataaagaaaaggatcgcgaaaaaaagaaacgaaaaaggtcgaag
tctaggtcaagatctaaatctcctaaggaaaaacgacataagtctaaacacgaaaaatct
agtggcagccatcgagagcgtgatggtaaaagaaagcggcatcgtaaatatgactacgaa
tctcctccagaagaatacgttcaagatgaacaagttagaatcaaagaagaactagaagaa
gacgtccaagttaaaaatgaggcttctgacgttgaagaaggtgagattgaagtccaagaa
agagtgaacagaggagtaggatcaaacatttctctgagtatagaagaggcaaaccgattg
agggcaaagctaggtctaaaacctcttcaagtcaaggaagataaacttgttcatgaagct
ggtggaggtggaggaggaggggagaattctttgagtataacagaaacaaacaaattaaga
gcaaagataggcctcaagccattacaacttcaagaagaaatacctggtcttgagcaagct
gatggtggcaatgatgatgatgaagaagaaaggaaagaagtgtttgttaaaacagaaaac
atttcagacaaaaaaaaggaagaaacaatacgtgaaaagctaaaaattcagaaagaaaag
agaaaaatagcagataaattaagtaaaacaaaatgcttgggagaatctgattcagagaat
gaagatgtgcttttatgggtgaaaaaaagtcgcgagttgcaggaggaaagagaaaaggca
gaaaaacgggccaaaatgcttgctgagatggatgaagagtttggtgttggggccttagtt
gaagaagaatttaaaggaatgaaagcatctggaaaggcctacacgagtaaagaccttcga
ggactcacggttggccacggagttaacgttttcaaagaaggtggttctgttgtgatgaca
ctacgtgatagagatgtattagatgaaagtgaagatgttttggaaaatgttaatattgtg
gaggaagagaaggcttccaaaaatgttgaaaataagaaaaagaaaccagagtacagacca
tatgaagaacccgagtttgatgagtttggaattgtaaaaaagaaatctgtcttgtcaaaa
tatgatgaagaacttgaaggtccgaagaaagaactgttcaaaattggatctacaagtata
ggtgatagagaaaaagaattggaacttatcaggttaaagctaaaacaacagcaaggaact
actctagatttaccagctttgaaacctgcctcagaatactatacagatgaagaaatggtg
cggttcagaaagtccaaaaagaaggtgagaaaggtgcgtaagcgaggggttctaaagcca
gatgatttgctaccactcccagaagagaatttaactagtcaccctgggtcaaaacctgta
gatcaagaggaaggtccagtattagaagcagaagaggacaacaacaaacaaaaagatatg
gaagttgatgaagctgaagttgaagatagtgaaatagttggcccagaagaagacctgact
ggagtgtttgttgaagaagatcaagctgaattagaacttcagtctgccttgaacaaagct
cgtaagctgaaacagaaggagtctcttaatacaggaatagaaaagatagctgaggttgtc
cttaaaaaagaacctaaacaggaggaatcttcggagaagattggaaatattgtcttaaac
tccacagctgagttttgtcggaaccttggagacattccaacttatgggatgtcgggaaac
cgagaggacgaagctgatgaaattatggattttgaacgggaattgatggaggagcagcag
ttaaaagaattagaagctcaaaaccgaggagcttggaatgaagttgatattgatgacaaa
cctgtggagattaatgaccaggagagcattcctatcttagaagaagagccagatgttggt
acaggaatggctgcggcccttcagttagcaatgaagaaaggatacttggagaatgaagtt
aaaaaaccagttagtgcccaaagacacagtgatcttcaagctcagagctataccattgaa
gaaaagttttatgatgatgacaaagcatctcgtagagatcgatacgtaggtccactgtca
gacttcaaagataaagacggttacaaacctgatataaagctggaatacatagatgacagt
ggcaggctgcttgatgctaaagaagctttccgctacctcagtcacaagtttcatggcaag
ggtccaggaaaaaataaagtggataaacgagcaaaaaaactggaacaggaagcaaaactg
cggcaaatgagttcaactgacactcctttgaacaccgtaaacttgatgcaggaaaagcag
aaagaactccagtctccatatctcatccttagtggtggaaacaaagctttgtcactaaca
cagactacaataataaaacctaagtga

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