KEGG   Limulus polyphemus (Atlantic horseshoe crab): 106460756
Entry
106460756         CDS       T08968                                 
Name
(RefSeq) replication factor C subunit 4-like
  KO
K10755  replication factor C subunit 2/4
Organism
lpol  Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03030  DNA replication
lpol03410  Base excision repair
lpol03420  Nucleotide excision repair
lpol03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lpol00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    106460756
   03410 Base excision repair
    106460756
   03420 Nucleotide excision repair
    106460756
   03430 Mismatch repair
    106460756
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lpol03032]
    106460756
   03036 Chromosome and associated proteins [BR:lpol03036]
    106460756
   03400 DNA repair and recombination proteins [BR:lpol03400]
    106460756
DNA replication proteins [BR:lpol03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    106460756
  DNA Replication Termination Factors
   ELG1-RFC complex
    106460756
Chromosome and associated proteins [BR:lpol03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    106460756
DNA repair and recombination proteins [BR:lpol03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     106460756
  Check point factors
   HRAD17(Rad24)-RFC complex
    106460756
SSDB
Motif
Pfam: Rep_fac_C AAA RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA_22 AAA_16 AAA_lid_RFC1 AAA_11 Mg_chelatase AAA_28 AAA_assoc_2 DUF815 SLFN-g3_helicase AAA_30 AAA_24 AAA_7 ResIII RuvB_N AAA_19 AAA_5 DEAD nSTAND3 AAA_3 DNAX_ATPase_lid bpMoxR AAA_18 nSTAND6 RNA_helicase
Other DBs
NCBI-GeneID: 106460756
NCBI-ProteinID: XP_013775945
UniProt: A0ABM1B6S6
LinkDB
Position
Unknown
AA seq 361 aa
MEAFFKGVRPGTSGLKDKTGSQKDGSKPGRKQAPPPWVEKYRPKTVDEVAFQEEVVTVLK
KTLQGADFPNLLFYGPPGTGKTSTILALGRQMFGEMYRSRILELNASDERGIQVIREKVK
NFAQQTASNRTPEGKPCPAFKIIILDEADSMTKAAQDALRRTMERQSKSTRFCLICNYVS
RIIGPLTSRCSKFRFKPLSKDILIQRLQDISEKESVKAEPGVLESLVDISEGDLRKAITF
LQSAHRLKGDLGINLDDILEIGGVVPSKWLDKLFDICKSDSYEKLETFVTDMVAEGFSAG
QLMGQLHDKIVFTEELNDKQKSVICNRLAVCDHRLMDGADEFLQIMDMMTVIMHQLCHAS
S
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggaagcatttttcaaaggagtaaggcctggtacatctggactcaaagacaaaactgga
agtcagaaagatggctccaaacctggcagaaagcaggcacctcctccttgggttgaaaaa
tatcgaccaaagactgtcgatgaagttgcatttcaagaagaggtggtaactgttctgaaa
aagacactacaaggtgctgattttccaaatttacttttttacggtccaccaggcacaggg
aaaacatcaacaatattagctctaggaaggcaaatgtttggggaaatgtatcgaagtcga
attctggaacttaatgcttctgatgaaagaggaattcaagttattcgagaaaaagttaaa
aactttgcccaacagactgcaagtaatcggacaccagaaggaaaaccttgccctgctttc
aaaattatcatactggatgaagcagattcaatgacaaaagcagctcaggatgccctaaga
agaacaatggaaaggcagtccaagtctacaagattctgcctcatttgtaattatgtcagt
aggataattggacctttaacatctagatgctccaaatttaggttcaaaccattatctaaa
gatatccttattcagaggttgcaagatataagtgaaaaggagagtgtaaaagctgaacct
ggcgttcttgagagtcttgtggacatttctgaaggagacctaagaaaagccatcacattt
ttgcaaagtgcacacaggttaaaaggtgacttgggtataaacttggatgacatcctagaa
attggtggggtagtaccatccaaatggttggataagctctttgacatttgtaagtctgat
tcatatgagaaactggaaacatttgttactgatatggtggctgaaggtttctcagctggt
caactgatgggtcagttgcatgataagattgtatttacagaagaattgaatgataaacag
aaatcagttatttgcaacagactggcagtttgtgatcatcgcctcatggatggagctgat
gaatttttacagataatggatatgatgacagtaatcatgcatcaactctgtcatgcctca
agttga

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