Limulus polyphemus (Atlantic horseshoe crab): 106460902
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Entry
106460902 CDS
T08968
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lpol
Limulus polyphemus (Atlantic horseshoe crab)
Pathway
lpol03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lpol00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106460902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lpol03041
]
106460902
03009 Ribosome biogenesis [BR:
lpol03009
]
106460902
Enzymes [BR:
lpol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
106460902
Spliceosome [BR:
lpol03041
]
Complex A
U1 snRNP components
U1 related factors
106460902
Complex B
106460902
Ribosome biogenesis [BR:
lpol03009
]
Eukaryotic type
Pre-60S particles
Helicases
106460902
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
106460902
NCBI-ProteinID:
XP_013776115
EnsemblRapid:
LOC106460902
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MSFRGRPGQRSVSRDHGGPRLRDSSMGRGASQGGRGVGRGGFGGGNGGTLRKNSLKGKQP
GDRLRKPRWDMSKLPPFQKNFYVEHMAVLRRTPEEVEMYRRVHDVTVRGRNIPMPIQDFM
EGNFPPYVMSAVQNQNYKKPTPIQAQGWSIALSGRDMVGIAQTGSGKTLAYILPAIVHIS
NQPYLERGDGPIVLVLAPTRELAQQIQQVASDFGHLSRIRNTCVFGGAPKGPQLRDLERG
AEICIATPGRLIDFLECGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLM
WSATWPKEVRALAEDFLKDYVQVNIGALQLSANHNILQIVDVCQETEKEYKLLKLLEEIM
GEKENKTLVFVETKKKVDDLTRRMRRDGWPAMCIHGDKAQPERDWVLNEFRGGKSPILVA
TDVAARGLDVEDIKFVINFDYPNCSEDYVHRIGRTARSNKSGTAYTFFTPNNIKQASDLI
SVLKEANQVVNPKLYELMEMSKGVSSGRGRNRWKNPGNQGSETRGYNQNYGRESRRDSSQ
RGGRDRSERGRNDQDQRRRSSSNFSNQRESNKFSNQPSQPLLPQPQGMGNFNMASHSGSS
ASGAHAGGPPNQRSGKMINSHHGKLVNQQGQAQNQHTGNQPNQMYNHQQPQQHAGNMHMN
GPSAPNQQGPMGMSGMMMPNMYGQYAGLQMQRAQSTMNGMFQSPPPPPPRN
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtcattccgtgggcgtccaggacaacgcagtgtatcacgtgatcatggtggacctagg
ttgagagacagtagcatgggacgtggggctagtcagggtggacgtggagttggtagaggt
ggctttggtggtggtaatggaggaacactccgaaaaaacagtttaaaaggaaaacaacct
ggagacagacttcgtaaacccagatgggatatgagtaaactgccaccatttcagaaaaac
ttctatgttgaacatatggctgtgttgagaagaaccccagaagaagttgaaatgtacaga
agagtccatgatgttactgttcgtggtcgaaatattcctatgcctattcaagattttatg
gaaggaaactttccaccttatgtgatgtcagctgttcaaaaccaaaactacaagaaacca
acacccattcaggcacaaggatggtccatagctttgagtggaagagacatggtgggaatt
gcacagacaggatccggaaagacattagcatatattcttccagccattgttcacatcagt
aatcagccatatttagaaagaggagatggccctattgttttagtactagccccaactcga
gaattagcacagcagattcaacaggttgcatcagactttggtcatttgtctagaattcga
aatacctgtgtatttggtggagcaccaaaaggtccacagctgcgtgaccttgaaagagga
gctgaaatttgcatagctacccctggtcgtcttattgattttctggaatgtggcaaaaca
aaccttcgaagatgtacatatttagttttggatgaagcagatcgtatgttggacatgggc
tttgaacctcagattaggaagatagttgaacagatcagacccgatcgacaaacactcatg
tggagtgccacatggccaaaggaagtgcgagctttagctgaggactttttgaaggattat
gtacaagtgaatattggagctcttcagcttagtgcaaaccacaacattcttcagattgtt
gatgtatgtcaagaaacagaaaaggaatacaaattattgaagttgttggaagaaatcatg
ggtgaaaaggagaacaagactcttgttttcgttgaaactaaaaagaaggttgacgatctt
acaagaagaatgagacgagatggatggcctgccatgtgtatccatggagacaaagcacaa
ccagaacgagattgggtattaaatgaatttagaggaggcaaatctccaattcttgttgct
actgatgtggctgccagaggcctggatgttgaggatataaagtttgtcataaactttgac
tacccaaactgctctgaagactacgtacatcgtattggacgcacagcacgaagcaacaag
tctggcacagcctatactttttttacacctaataacattaagcaggccagtgatttgata
tctgttctgaaagaagccaatcaggttgttaacccaaagctgtatgaactgatggagatg
tctaaaggagtctcttcaggaagaggtcgcaatcgctggaagaaccctggtaatcaggga
agtgagacccgtggttacaatcaaaactatggacgagaaagcagaagagatagtagtcaa
agaggtggtagggatagaagtgagaggggtcgtaatgaccaggaccaaagaagaagatca
agctctaatttttcaaaccaaagagaatcaaataagttcagcaaccaaccatcacagcct
cttcttccccagcctcaagggatgggaaatttcaacatggccagtcattctggtagcagt
gcttctggtgcacatgctggaggtccaccaaatcagagaagtggtaagatgattaactcg
caccatggaaagctagtgaaccagcaaggacaagcacaaaatcaacacactggaaaccag
ccaaaccagatgtataaccatcaacagccacagcaacatgctggaaatatgcatatgaat
ggaccaagtgctcctaaccagcaaggtccaatgggaatgtctggaatgatgatgcccaac
atgtatgggcagtatgcaggcctccagatgcaaagagctcaatcaacaatgaatggaatg
ttccagtctccaccgccacctcctcctcgtaactga
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